Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30058
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   1.9  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    24   4.4  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    24   4.4  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 533 FKDTMAHNKNNIIFDFRFCFPSLYSYLN 616
           F  T   N    I D  FC P+L S +N
Sbjct: 156 FCPTFVRNSRTSIIDLTFCSPALASSMN 183


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 86  CNPKNYDLISTIFSQFSL 33
           CNP+ +D +  ++ QF+L
Sbjct: 136 CNPEGFDFVFCLWRQFTL 153


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 86  CNPKNYDLISTIFSQFSL 33
           CNP+ +D +  ++ QF+L
Sbjct: 150 CNPEGFDFVFCLWRQFTL 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,394
Number of Sequences: 2352
Number of extensions: 12156
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)