Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30057
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical p...    31   0.90 
Z81030-14|CAJ43441.1|   75|Caenorhabditis elegans Hypothetical p...    31   0.90 
U23515-4|AAU87816.1|  333|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (...    28   8.4  
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical
           protein R17.3 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 171 CGCDGDCVIYGYCCQDFVDLCIEKD 245
           C CD  CV  G CC D+  +C  +D
Sbjct: 219 CYCDEHCVTLGDCCSDYTFVCPPRD 243


>Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical
           protein C01G10.4 protein.
          Length = 72

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 289 TANTETSSFYNQRYNFSFNFNHNDDYTQTHCYTFN*NYHYYCFSQTYDSHYH 444
           TAN   + +Y    N   N+N+N+ YT  + Y  N N  YY  +  Y++ Y+
Sbjct: 16  TANAYYTYYYYPNNN---NYNNNNGYTTYYYYPNNNNNGYYYNNNGYNNGYN 64


>Z81030-14|CAJ43441.1|   75|Caenorhabditis elegans Hypothetical
           protein C01G10.17 protein.
          Length = 75

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
 Frame = +1

Query: 304 TSSFYNQRYNFSFNFNHNDDYTQTHCYTFN*NYHYY-------CFSQTYDSHYH 444
           T ++Y   Y  + N+N+N+ YT  + Y  N N  YY       C S  Y ++Y+
Sbjct: 17  TDAYYTYYYYPNNNYNNNNGYTTYYYYPNNNNNGYYYNNGCSGCNSNGYTTYYY 70


>U23515-4|AAU87816.1|  333|Caenorhabditis elegans Hypothetical
           protein R144.12 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 184 ETASSMATAVKTS*IYASKKIPKHSDRRNWFDRCITANTETSSFYNQRYNFSFNFNHNDD 363
           ET +S +  V+T    A     +  + +   D   + N E   F  +R    ++    ++
Sbjct: 102 ETVASGSLGVRTGLNLAVPMYSRFKNAQEALDYFKSQNPEGMDFLGERVPIRWDSEIAEE 161

Query: 364 YTQTHCYTFN*NYHYYCF 417
           +T   CY F+ N H++ F
Sbjct: 162 FTD--CYAFSDNAHHFLF 177


>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 5
           protein.
          Length = 1434

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 234 IEKDSETQ*SPKLVRPLHYRKHR 302
           + KD E + +PK VRP  YRK R
Sbjct: 346 LRKDLEVEEAPKSVRPPRYRKSR 368


>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
           protein Y38C1AB.4 protein.
          Length = 1393

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 234 IEKDSETQ*SPKLVRPLHYRKHR 302
           + KD E + +PK VRP  YRK R
Sbjct: 346 LRKDLEVEEAPKSVRPPRYRKSR 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,496,978
Number of Sequences: 27780
Number of extensions: 241905
Number of successful extensions: 881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)