Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30052
(523 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 102 6e-21
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 101 1e-20
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 100 2e-20
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 96 4e-19
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 95 9e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 88 1e-16
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 87 2e-16
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 84 2e-15
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 82 9e-15
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 81 1e-14
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 81 1e-14
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 81 2e-14
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 79 5e-14
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 77 2e-13
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 77 2e-13
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 73 3e-12
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 73 4e-12
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 72 7e-12
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 3e-11
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 70 3e-11
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 66 5e-10
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 65 8e-10
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 62 6e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 61 1e-08
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 61 2e-08
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 61 2e-08
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 56 5e-07
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 54 3e-06
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 54 3e-06
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 51 1e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 5e-04
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 46 5e-04
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 38 0.18
UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein; ... 33 5.2
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 102 bits (244), Expect = 6e-21
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = +2
Query: 17 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 196
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 197 LRHIYIRSPVGVKTVTKIFVGANVM-ELHLHISAGHQAV 310
RH+Y+R GV ++TKI+ G + H S G ++V
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 83.4 bits (197), Expect = 3e-15
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
GR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 81 GRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 101 bits (241), Expect = 1e-20
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = +2
Query: 17 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 196
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 197 LRHIYIRSPVGVKTVTKIFVGA 262
RHIY+R VGV + K++ G+
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGGS 82
Score = 58.4 bits (135), Expect = 9e-08
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
G G+ PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 81 GSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 100 bits (240), Expect = 2e-20
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 209 YIRSPVGVKTVTKIFVG 259
Y+R +GV KI+ G
Sbjct: 68 YLRQGIGVGGFQKIYGG 84
Score = 69.7 bits (163), Expect = 4e-11
Identities = 28/54 (51%), Positives = 42/54 (77%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
GR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 84 GRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 96.3 bits (229), Expect = 4e-19
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +2
Query: 17 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 196
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 197 LRHIYIRSPVGVKTVTKIF 253
LRH+YIR P G+ + K F
Sbjct: 61 LRHLYIR-PTGLTGLCKAF 78
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1
Query: 259 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
+KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 81 KKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 95.1 bits (226), Expect = 9e-19
Identities = 40/88 (45%), Positives = 62/88 (70%)
Frame = +2
Query: 17 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 196
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 197 LRHIYIRSPVGVKTVTKIFVGANVMELH 280
R +Y+R GV ++ K++ GA +H
Sbjct: 70 ARKVYLRQYTGVGSLKKVYGGAARKGVH 97
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 417
G R GV HF ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 90 GAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 41 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 220
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 221 PVGVKTVTKIFVGAN 265
P GV + +++ G+N
Sbjct: 70 PTGVGALRRVY-GSN 83
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 387
KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 84 KRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 87.0 bits (206), Expect = 2e-16
Identities = 37/75 (49%), Positives = 51/75 (68%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 209 YIRSPVGVKTVTKIF 253
YIR +G KI+
Sbjct: 72 YIRGGIGTGEFRKIY 86
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 259 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 411
RKR G+ P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 89 RKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 83.8 bits (198), Expect = 2e-15
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +2
Query: 11 GKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 190
GK + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCA
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCA 83
Query: 191 AILRHIYIRSPVGVKTVTKIF 253
A+LR IY+R VG ++K F
Sbjct: 84 AVLRAIYLRPGVGYGGLSKRF 104
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 81.8 bits (193), Expect = 9e-15
Identities = 34/74 (45%), Positives = 50/74 (67%)
Frame = +2
Query: 32 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 211
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 212 IRSPVGVKTVTKIF 253
+ + +GV + + +
Sbjct: 67 LNNGIGVMALRRAY 80
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 280 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
PSH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 90 PSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +2
Query: 23 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 202
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 203 HIYIRSPVGVKTVTKIFVG 259
+YIR GV T ++F G
Sbjct: 65 KVYIRGGDGVATYRRVFGG 83
Score = 55.2 bits (127), Expect = 9e-07
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 417
G +RNGV P+HF +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 83 GNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 81.4 bits (192), Expect = 1e-14
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +2
Query: 23 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 202
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 203 HIYIRSPVGVKTVTKIF 253
H+Y GV + K++
Sbjct: 85 HLYFHPDSGVDRLRKVY 101
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 396
+KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 104 KKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 20/97 (20%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 148
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 149 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFVG 259
L PYDPDW+Y R A+I R IY+R +GV KI+ G
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGG 104
Score = 69.7 bits (163), Expect = 4e-11
Identities = 28/54 (51%), Positives = 42/54 (77%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
GR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 104 GRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 209 YIRSPVGVKTVTKIF 253
Y+R VGV ++K +
Sbjct: 78 YVRPNVGVGALSKFY 92
Score = 37.9 bits (84), Expect = 0.14
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 256 GRK-RNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 417
GRK RNG +H +S I R L L++L LVE G R L+ QG+R+LD I
Sbjct: 93 GRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSI 148
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 209 YIRSPVGVKTVTKIFVGAN 265
Y+R GV +T +F N
Sbjct: 117 YVRGHWGVGNLTHMFGSVN 135
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 209 YIRSPVGVKTVTKIFVG 259
YI PVGV ++ + G
Sbjct: 63 YIDGPVGVNSLRTHYGG 79
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 414
G+K G P F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 79 GKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 73.3 bits (172), Expect = 3e-12
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 209 YIRSPVGVKTVTKIFVGANVMELHLHISAGHQAVLHARLCNRW 337
Y++ G+ T+ IF G+N +L HQA H ++ RW
Sbjct: 69 YLKPHTGISTLKHIF-GSNKDRGNLRNK--HQA-CHGKIL-RW 106
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +2
Query: 20 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 190
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR A
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 191 AILRHIYIRSPVGVKTVTKI 250
A+ RHIY+R VGV + K+
Sbjct: 133 AVARHIYMRKTVGVGRLRKV 152
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 262 KRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 417
K G P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 157 KNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 72.1 bits (169), Expect = 7e-12
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 209 YIRSPVGVKTVTKIFVGA 262
Y+ P+GV+ + + G+
Sbjct: 63 YVDGPLGVERMRSFYGGS 80
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 417
G K G P+ F + SGS+ RKALQ LEA L+ V D GR ++ G LD +
Sbjct: 79 GSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 47 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 205
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +1
Query: 265 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 209 YIRSPVGVKTVTKIFVG 259
YI PVG++ + + G
Sbjct: 63 YIDGPVGIERLRTYYGG 79
Score = 58.4 bits (135), Expect = 9e-08
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
GRK G P F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 79 GRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 66.1 bits (154), Expect = 5e-10
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 41 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 220
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 221 PVGVKTVTKIFVG 259
PVGV + + G
Sbjct: 67 PVGVSRLRTYYGG 79
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 411
GR+ G P F + SG+I RK LQ LE LVEK ++ GR++T +GR +D
Sbjct: 79 GRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 65.3 bits (152), Expect = 8e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 23 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 202
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 203 HIYIRSPVGVKTVTKIF 253
H+Y G+ + +++
Sbjct: 85 HLYFHPDEGIGRLRRVY 101
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 RKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 396
RKR G P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 104 RKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 62.5 bits (145), Expect = 6e-09
Identities = 25/74 (33%), Positives = 46/74 (62%)
Frame = +2
Query: 32 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 211
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 212 IRSPVGVKTVTKIF 253
I +GV + + F
Sbjct: 110 IHPDIGVGFLRRQF 123
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +2
Query: 35 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 214
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 215 RSPVGVKTVTKIFVGANV 268
+ + GAN+
Sbjct: 74 HHDASLSGLA-FHYGANM 90
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +2
Query: 26 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 205
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 206 IYIRSPVGVKTVTKIFVG 259
+YI +G+ ++ + G
Sbjct: 62 LYINGYLGISRMSSEYGG 79
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +2
Query: 29 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 208
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 209 YIRSPVGVKTVTKIFVG 259
YI PVG++ + + G
Sbjct: 61 YIDGPVGIERLRTFYGG 77
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
GRKR G P F + SG+I R AL LE L V+K ++G R++T GR LD++
Sbjct: 77 GRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTREG-RVVTPMGRSFLDKV 129
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 56.0 bits (129), Expect = 5e-07
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 26 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 202
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 203 HIY-IRSPVGVKTVTKIFVG 259
+Y P+G++T I+ G
Sbjct: 62 KLYKSPEPIGIETFRTIYGG 81
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 411
GR+ G P HF ++ GS+ RK LQ LE LV KV GR ++ GR LD
Sbjct: 81 GRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 53.6 bits (123), Expect = 3e-06
Identities = 20/76 (26%), Positives = 45/76 (59%)
Frame = +2
Query: 32 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 211
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 212 IRSPVGVKTVTKIFVG 259
I +G + + +I+ G
Sbjct: 65 IYKKLGTRQLVRIYNG 80
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +2
Query: 32 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 211
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 212 IRSPVGVKTVTKIFVG 259
+ P+G+ + K + G
Sbjct: 63 LHGPIGINELRKDYGG 78
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +1
Query: 205 YLHSLTCWSQDCHQDLCGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 384
YLH + +D G K +G +H + G+I R A+ LE L +EKV+ GRI+
Sbjct: 62 YLHG-PIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIV 120
Query: 385 TTQGRRDLDRI 417
+ QG + LDR+
Sbjct: 121 SKQGMQKLDRL 131
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +2
Query: 26 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 205
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 206 IYIRSPVGVK 235
+ P+G++
Sbjct: 72 VAQNEPIGIE 81
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 348
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 46.0 bits (104), Expect = 5e-04
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 50 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 229
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 230 VKTVTKIFVG 259
+ + + G
Sbjct: 63 INGLRSEYGG 72
Score = 41.5 bits (93), Expect = 0.011
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 256 GRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 417
G K G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 72 GGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 37.5 bits (83), Expect = 0.18
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -1
Query: 250 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSS 71
DLG + + V + + GS++ +EP+ ++ S+LF L +H F
Sbjct: 80 DLGHGANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGC 139
Query: 70 DSFNNLVLFNILYCDGTHLA 11
S + L+L ++ Y + H A
Sbjct: 140 QSSDELLLVHVFYSNSRHRA 159
>UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein; n=1;
Tetrahymena thermophila SB210|Rep: Chitin synthase family
protein - Tetrahymena thermophila SB210
Length = 1312
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +3
Query: 150 WLRMTLIGSMCVVLPSFVIFTFAHLLESRLSPRSLW--AQT*WSYT-----FTFLQVIRQ 308
WLR+ +I C+ SF I F HLL P+ +W + WSYT + F +I
Sbjct: 1098 WLRLYVIIMACLNTGSFFILLFVHLL---FQPKLVWYIIISYWSYTIYQPIYNFTLIIFS 1154
Query: 309 YC 314
+C
Sbjct: 1155 FC 1156
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 32.7 bits (71), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 260 ANVMELHLHISAGHQAVLHARLCNRWRH 343
A +E H +AG + +HAR+ RWRH
Sbjct: 196 AGAVEQHRRQAAGQRIFMHARIAQRWRH 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,229,712
Number of Sequences: 1657284
Number of extensions: 8848887
Number of successful extensions: 22578
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 21901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22568
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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