Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30052
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.94 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = +2

Query: 206 IYIRSPVGVKTVTKIFVGANVMELHLHISAGHQAVLHARLCNRWRH*SLLRK 361
           I++   + ++  T I +    + +H+  SA    V    + NRW+    +RK
Sbjct: 420 IFVLCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVINRWKFIEFIRK 471


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 193 HPSSYLHSLTCWSQDCHQDLC 255
           H +S     TCW+    + LC
Sbjct: 108 HETSCTRYWTCWNGTATEQLC 128


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 230 LQQVSECKYDEGWQHNAHRTNQ 165
           L +  +C Y EGW   +   +Q
Sbjct: 219 LPKQEDCFYQEGWNGQSFDVSQ 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,893
Number of Sequences: 336
Number of extensions: 2273
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)