Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30050
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 33 0.056
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 29 0.52
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 29 0.52
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.69
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 29 0.91
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 28 1.2
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 28 1.2
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 28 1.2
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 27 2.1
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 4.8
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 26 4.8
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 26 6.4
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 26 6.4
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 8.5
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 25 8.5
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 32.7 bits (71), Expect = 0.056
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKYPVGRISTSNLDAQRV 220
G+ + +LFLPESP++L+ E AL ++ M E + S + S+++ +
Sbjct: 189 GILLMVGVLFLPESPRYLIYKGRDEEALRIMCNMAELSPESEIIQTNFNTIKSDIEIEMA 248
Query: 221 GG 226
GG
Sbjct: 249 GG 250
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 35 APGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKYPVGRI 190
AP L + L + PESP++LL + E +L+ ++ + + Y V I
Sbjct: 248 APALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIHPEAKPAEIAYKVSLI 299
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 29.5 bits (63), Expect = 0.52
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKYPVGRISTSNLDAQRV 220
G+ + +LFLPESP++L+ E AL ++ E + S + S+++ +
Sbjct: 189 GIFLMVGVLFLPESPRYLIYKGRDEEALRIMCQTAELDPESEIIQTNFNTIKSDIEMEMA 248
Query: 221 GG 226
GG
Sbjct: 249 GG 250
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVLATMYE 148
G+ + +LFLPESP++L+ E A+ VL+ E
Sbjct: 193 GIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAE 228
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 28.7 bits (61), Expect = 0.91
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 38 PGLAAALILLFLPESPKFLLANKGPEAALPVLATMY 145
P IL++LPESP+ L+ + + A LA +Y
Sbjct: 256 PAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIY 291
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 366 YSARLDRSEHNHMPDYIG*IPKCNHGPNGIELPR*RVCLRVPDLDGHGAV 515
+SAR S + + + G P C+H N + L +PD+D H V
Sbjct: 232 FSARTPASNQSSVSEDFGAAPNCDHKHNSVTLSD----FALPDIDQHDTV 277
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVLA 136
G+ + + FLPESP++L++ E AL ++A
Sbjct: 189 GIITFIGISFLPESPRYLISVGRDEEALQIMA 220
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVL 133
G+ + ++FLPESP++L+A + AL ++
Sbjct: 159 GIITLVGIIFLPESPRYLIAIGKDDEALKIM 189
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 41 GLAAALILLFLPESPKFLLANKGPEAALPVL 133
G+ + + FLPESP++L+A E AL ++
Sbjct: 189 GIIMFIGISFLPESPRYLIAIGKDEEALDIM 219
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.2 bits (55), Expect = 4.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 311 PFLWYRVVCTCGYRISSTVFCATR 382
PF+WY V+ + + +FC R
Sbjct: 572 PFVWYSVISLVAFFVIVQIFCLAR 595
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 654 LLIVSLCSGCAASILAAIVVDVF 722
LLIVSL +GC AS A + VF
Sbjct: 22 LLIVSLITGCIASPAAEVAETVF 44
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 516 FAVTYLAIGFFINKIGRKTLYCGIMFVCGVATVGAAFVPHGGAATALLIVSLCSGCAASI 695
F + L I IGR+ +Y + + V + A P+ + C GC
Sbjct: 150 FGIGPLVISPLSEMIGRRIVYLVTLMIYIVLQIPCALAPNIACLLIVRFFCGCFGCTPLT 209
Query: 696 LA-AIVVDVF 722
LA ++ DV+
Sbjct: 210 LAGGVISDVW 219
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 1 VPSASVRLVLVRARSSGCLDPAVPTRKPKISAGQQGPGSG 120
+ ++V L LV+ +G +DP PT K A + GSG
Sbjct: 275 IGGSTVDLDLVQIHPTGFVDPKDPTALTKFLAAEALRGSG 314
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 715 STTMAANIEAAHPEHSETMSRAVAAPPWGTNAAPTVATPQ 596
ST + A P+ S + + A PP G A PT A Q
Sbjct: 427 STVVPQESATATPKRSPSATPTSALPPIGKFAPPTTAKAQ 466
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 62 LLFLPESPKFLLANKGPEAALPVL 133
+LFLPESP++L E + +L
Sbjct: 198 MLFLPESPRYLAVKGRNEECMKIL 221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,320,896
Number of Sequences: 5004
Number of extensions: 73975
Number of successful extensions: 224
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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