Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30049
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1 |Sc... 118 7e-28
SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subuni... 50 5e-07
SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subuni... 49 9e-07
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 7.0
SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces ... 26 7.0
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 26 7.0
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 26 7.0
SPAC27D7.04 |omt2||4-alpha-hydroxytetrahydrobiopterin dehydratas... 26 7.0
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 25 9.3
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 25 9.3
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 25 9.3
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 25 9.3
>SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 177
Score = 118 bits (285), Expect = 7e-28
Identities = 54/82 (65%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDN-RHGHITSLAVKRS 438
LPENYQ+KYY YH +SWP LSYVA D KG +VGYVLAKMEE+ +D HGHITS++V RS
Sbjct: 22 LPENYQLKYYLYHAISWPMLSYVATDPKGRVVGYVLAKMEEEPKDGIPHGHITSVSVMRS 81
Query: 439 HRRLGLAQKLMNQASLAMVECF 504
+R LGLA++LM Q+ AMVE +
Sbjct: 82 YRHLGLAKRLMVQSQRAMVEVY 103
Score = 73.3 bits (172), Expect = 4e-14
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +3
Query: 510 KYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADGEDAYSMMRDLSAFAVD 668
KY+SLHVRKSNRAA++LY ++L F + IE KYYADGEDAY+M +D S D
Sbjct: 106 KYMSLHVRKSNRAAIHLYRDTLQFDVQGIESKYYADGEDAYAMHKDFSTLKFD 158
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 200 MNIRCARPSDLMNMQHCN 253
M+IR AR SDL MQ+CN
Sbjct: 1 MDIRPARISDLTGMQNCN 18
>SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subunit
Nat3 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 180
Score = 49.6 bits (113), Expect = 5e-07
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 262 LPENYQMKYYFYHGLSWPQLSYVAEDEKGH--IVGYVLAKMEEDGEDNRHGHITSLAVKR 435
L E + + +Y + WP L V E + ++GY++ K E G++ H H+T++ V
Sbjct: 23 LTETFNISFYLSYLNKWPSLCVVQESDLSDPTLMGYIMGKSEGTGKE-WHTHVTAITVAP 81
Query: 436 SHRRLGLAQKLMN 474
+ RRLGLA+ +M+
Sbjct: 82 NSRRLGLARTMMD 94
>SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 150
Score = 48.8 bits (111), Expect = 9e-07
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +1
Query: 229 PYEHAALQLLC------LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDG 390
PY H L+ +C L E Y Y Y WP+ S+VA D +G V+ K +
Sbjct: 6 PYSHQYLKDICQLIQKDLSEPYSKYVYRYFVHQWPEFSFVALDND-RFIGAVICKQDVHR 64
Query: 391 EDNRHGHITSLAVKRSHRRLGLAQKLMNQASLAMVE 498
G+I LA+ + +R G+A KL QASL +++
Sbjct: 65 GTTLRGYIAMLAIVKEYRGQGIATKL-TQASLDVMK 99
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 7.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Frame = +1
Query: 232 YEHAALQLLCLPENYQMKYYFYHGLSWPQLSYVAE------DEKG-----HIVGYVLAKM 378
YE+ + Q + +K Y GL+W L Y A+ DE G ++ + LA +
Sbjct: 398 YEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISF-LASL 456
Query: 379 EEDGEDNRH 405
+E G NRH
Sbjct: 457 KEKGIQNRH 465
>SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 400
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 307 KVHGRSNISSDSSLADTIVAMLHV 236
K+HGR + + SS+A I AML +
Sbjct: 144 KIHGRGSCDAKSSVAAQIFAMLEL 167
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -3
Query: 411 VTMTIILTVLFHFCQNISNNMS 346
+ +I+LT+LF+F N+S+ M+
Sbjct: 278 IPFSIVLTILFYFDHNVSSVMA 299
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 7.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +1
Query: 322 SYVAEDEKGHIVGY---VLAKMEEDGEDNRHGHITSLAVKRSHRRLGLA-QKLMNQASLA 489
++V E + IVG E+D +D+ HG H R G+A Q++ N S
Sbjct: 558 AFVEEKNRYLIVGTSTSAFTSNEDDDDDDGHG----------HNRFGVAFQEVANMTSAT 607
Query: 490 M-VECFQENMCHC 525
+ ++CF+ ++ C
Sbjct: 608 LQMDCFEASVIEC 620
>SPAC27D7.04 |omt2||4-alpha-hydroxytetrahydrobiopterin dehydratase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 96
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 458 LRNS*IRHHLQWLNAFRKICVIACKKKQQSCTESLHKLFGF 580
LR + HH +W N + K+ + + TE KL F
Sbjct: 48 LRAQQLNHHPEWTNVYNKVDITLTTHDTKGLTEKDLKLAEF 88
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 541 LLFLTCNDTYFPESIQPLQVMPDS*VSEL 455
L++ T TY P S L ++P S +S L
Sbjct: 162 LIYSTYTSTYLPNSTIDLSILPHSTISTL 190
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 678 QFYYQLQKHSDLASWNMHLLHQHSTLAQF 592
++++ L D A W++H HQ S L F
Sbjct: 404 EYFFSLIHDCDYAIWSVHDEHQFSELLAF 432
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 243 SIATIVSARELSDEILLLPWT 305
+IATI S+ L+DEI LP T
Sbjct: 129 NIATIQSSHSLADEIYFLPVT 149
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 399 IILTVLFHFCQNISNNMSFFIFSYITELGP 310
++LT L H + +N + F+ Y+ +L P
Sbjct: 252 VVLTTLMHMAWALLDNPNLFVEPYVQQLMP 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,063,127
Number of Sequences: 5004
Number of extensions: 59465
Number of successful extensions: 149
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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