Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30045
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   119   1e-27
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   119   1e-27
AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p pro...    28   3.9  
AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA...    28   3.9  
AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-P...    28   5.2  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  119 bits (287), Expect = 1e-27
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = +1

Query: 37  MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
           MK N  V+SSRRKNRKRHF APSHI R  MS+PLSKELR K+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 217 HYKGQQVGKVMQVIVKSLL 273
           H+KG QVGKV+Q   K  +
Sbjct: 61  HFKGNQVGKVVQAYRKKFV 79



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
           YRKKFVVY+E+I R  ANG   YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 74  YRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  119 bits (287), Expect = 1e-27
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = +1

Query: 37  MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
           MK N  V+SSRRKNRKRHF APSHI R  MS+PLSKELR K+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 217 HYKGQQVGKVMQVIVKSLL 273
           H+KG QVGKV+Q   K  +
Sbjct: 61  HFKGNQVGKVVQAYRKKFV 79



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
           YRKKFVVY+E+I R  ANG   YVGIHPSK +IVKLK++KDRKAIL+
Sbjct: 74  YRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120


>AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p
           protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = -1

Query: 345 TLKGECRHMLLHHWPXLXESSQCIQQTFYDNLHHFANLLAFVVSTYNLNFI 193
           T K + R ++   WP + + S   +   + + +  +NL+ F++     N+I
Sbjct: 306 TYKPDSRQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMIKDVQDNYI 356


>AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA
           protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = -1

Query: 345 TLKGECRHMLLHHWPXLXESSQCIQQTFYDNLHHFANLLAFVVSTYNLNFI 193
           T K + R ++   WP + + S   +   + + +  +NL+ F++     N+I
Sbjct: 306 TYKPDSRQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMIKDVQDNYI 356


>AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-PA
           protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 12  CRFGEERQNE---VQQAGDFLKK--EKQEEAFQCSFTYXAS 119
           C   EE  NE   ++  GD  +K  +  EEA QC FT+ AS
Sbjct: 239 CIMFEETTNEFIKMRYDGDAFRKLFKNNEEAHQCDFTFFAS 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,578,093
Number of Sequences: 53049
Number of extensions: 312499
Number of successful extensions: 720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)