Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30045
(396 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 79 1e-15
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 79 1e-15
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 79 1e-15
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven transme... 27 6.4
Z81528-8|CAB04288.2| 643|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 26 8.5
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 26 8.5
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 79.0 bits (186), Expect = 1e-15
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK N V+S K+RK HF+APSH R MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 217 HYKGQQVGKVMQVIVKSLL 273
+KG G+V++ K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSK 344
YRKKFV++I++I R ANG+T ++GIHPSK
Sbjct: 73 YRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 79.0 bits (186), Expect = 1e-15
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK N V+S K+RK HF+APSH R MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 217 HYKGQQVGKVMQVIVKSLL 273
+KG G+V++ K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 49.2 bits (112), Expect = 1e-06
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSK 344
YRKKFV++I++I R ANG+T ++GIHPSK
Sbjct: 73 YRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 79.0 bits (186), Expect = 1e-15
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +1
Query: 37 MKFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRG 216
MK N V+S K+RK HF+APSH R MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 217 HYKGQQVGKVMQVIVKSLL 273
+KG G+V++ K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 68.1 bits (159), Expect = 2e-12
Identities = 27/47 (57%), Positives = 40/47 (85%)
Frame = +3
Query: 255 YRKKFVVYIERIXRXXANGATAYVGIHPSKCVIVKLKMNKDRKAILD 395
YRKKFV++I++I R ANG+T ++GIHPSK I KLK++KDR+A+++
Sbjct: 73 YRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVE 119
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 291 ESSQCIQQTFYDNLHHFANLLAFVVSTYNL--NFIVFANRHGFYI 163
E Q +QQ F + + FV+STY NF F N+ GFYI
Sbjct: 324 ELQQKVQQRFQKSYEIIVSQSDFVISTYTAGDNFCKFDNK-GFYI 367
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 291 ESSQCIQQTFYDNLHHFANLLAFVVSTYNL--NFIVFANRHGFYI 163
E Q +QQ F + + FV+STY NF F N+ GFYI
Sbjct: 324 ELQQKVQQRFQKSYEIIVSQSDFVISTYTAGDNFCKFDNK-GFYI 367
>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical protein
D2005.4 protein.
Length = 1188
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 22 GKSDRMKFNKQVTSSRRKNRKRHFSAPS 105
G S++M K +S RKN +H+S P+
Sbjct: 1029 GYSNKMGNKKNKSSGSRKNHSQHYSQPT 1056
>Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical
protein C50C10.7 protein.
Length = 358
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 267 TFYDNLHHFANLLAF-VVSTYNLNFIVFANRHGFY 166
+F++ + F NL A V TY FIVF + + FY
Sbjct: 51 SFFEFFYAFVNLFAGPFVHTYGSAFIVFQDMNTFY 85
>AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven
transmembrane receptor 2 protein.
Length = 358
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 267 TFYDNLHHFANLLAF-VVSTYNLNFIVFANRHGFY 166
+F++ + F NL A V TY FIVF + + FY
Sbjct: 51 SFFEFFYAFVNLFAGPFVHTYGSAFIVFQDMNTFY 85
>Z81528-8|CAB04288.2| 643|Caenorhabditis elegans Hypothetical
protein F35E2.9 protein.
Length = 643
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 283 SMYTTNFLR*PASLCQPVGLCSV 215
+ YT +FL SLC+P G+CS+
Sbjct: 254 TFYTMSFLY--KSLCEPTGICSL 274
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 40 KFNKQVTSSRRKNRKRHFSAPSHIXRVXMSSPLSKELRXKFNVKSMPIRKDDEVQVVRGH 219
KFN+ V RR N K+ P H + + +++++ S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 220 YKG 228
YKG
Sbjct: 149 YKG 151
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -1
Query: 237 NLL--AFVVSTYNLNFIVFANRHGFYIEFXS*FLRQG 133
NLL A VV ++NL+ ++ A +HG ++E L+QG
Sbjct: 11 NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,506,827
Number of Sequences: 27780
Number of extensions: 157893
Number of successful extensions: 375
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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