Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30043
         (815 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PTV7 Cluster: ENSANGP00000002136; n=4; Endopterygota|...    38   0.30 
UniRef50_A6LU68 Cluster: Uncharacterized membrane protein precur...    36   0.92 
UniRef50_UPI0000E21639 Cluster: PREDICTED: similar to PDGF assoc...    33   8.6  
UniRef50_Q4N4P2 Cluster: Peptidyl-prolyl cis-trans isomerase; n=...    33   8.6  
UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, wh...    33   8.6  
UniRef50_Q13442 Cluster: 28 kDa heat- and acid-stable phosphopro...    33   8.6  

>UniRef50_Q7PTV7 Cluster: ENSANGP00000002136; n=4;
           Endopterygota|Rep: ENSANGP00000002136 - Anopheles
           gambiae str. PEST
          Length = 169

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
 Frame = +3

Query: 3   QRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXHPTKAKGVSGLIEVENPN 182
           QRK DE++KKWRK +                               AKG +G+I+++NPN
Sbjct: 25  QRKKDEEEKKWRKTR--EQDSDEDEDEDGDGEENDSDESESEEEENAKGAAGVIQIQNPN 82

Query: 183 RVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTLKVKRSKRALTSLDSP 362
           RV              D  +PQL+          E+L+  R+     KR     T+    
Sbjct: 83  RVAKKSHRKVEEVAEDD--EPQLTR------REKEELEKQRAAAAYQKRHAEGKTAQAKA 134

Query: 363 SFANNA-----KKQLSAERQRKNLKKILQLKKG 446
             A  A     + + +A R+ +  +K  ++K G
Sbjct: 135 DLARLAIIKQHRAEAAARREAEKKEKEAKMKSG 167


>UniRef50_A6LU68 Cluster: Uncharacterized membrane protein
           precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
           Uncharacterized membrane protein precursor - Clostridium
           beijerinckii NCIMB 8052
          Length = 583

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +3

Query: 582 MSTFIVFTEA*LLLSTLANQILSYLFFVLVISYT*LLNKKYISKYLTIYSWS*LMFPNQL 761
           ++TF +F  A  + ST   Q+ S    ++VIS   L  KKY+S  + +++ S LM P  +
Sbjct: 298 LATFYIFNPAIFIDSTFWGQVDSLFTLLIVISIYLLYEKKYVSSSV-MFALSVLMKPQGI 356

Query: 762 IIFCIFTYSIFR 797
           I   +  + + R
Sbjct: 357 IFIPVLFFELVR 368


>UniRef50_UPI0000E21639 Cluster: PREDICTED: similar to PDGF
           associated protein; n=1; Pan troglodytes|Rep: PREDICTED:
           similar to PDGF associated protein - Pan troglodytes
          Length = 187

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 79  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 137

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 138 KTEQAKADLARL 149


>UniRef50_Q4N4P2 Cluster: Peptidyl-prolyl cis-trans isomerase; n=2;
           Theileria|Rep: Peptidyl-prolyl cis-trans isomerase -
           Theileria parva
          Length = 445

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +3

Query: 285 EQLQPIRSFTLKVKRSKRALTSLDSPSFANNAKKQLSAE--RQRKNLKKI-LQLKK 443
           +QL+P + F +K  R KR L+ LDS    +NA K  SA    Q K+L K  +Q+K+
Sbjct: 205 QQLKPSKFFLVKCIRDKRLLSFLDSDEEEDNAVKIKSAHDMLQDKSLSKASVQIKE 260


>UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_79,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 435

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +3

Query: 324 KRSKRALTSLDSPSFANNAKKQLSAERQRKNLKKIL--QLKKGRQS 455
           K +KRAL + D   F NN K  +  ER RK L++IL  Q ++G  S
Sbjct: 151 KEAKRALVTQDQVQFVNNCK--IKVERPRKFLERILNPQAREGELS 194


>UniRef50_Q13442 Cluster: 28 kDa heat- and acid-stable
           phosphoprotein; n=30; Deuterostomia|Rep: 28 kDa heat-
           and acid-stable phosphoprotein - Homo sapiens (Human)
          Length = 181

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 73  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 131

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 132 KTEQAKADLARL 143


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,339,217
Number of Sequences: 1657284
Number of extensions: 8066527
Number of successful extensions: 17216
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17201
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)