Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30041
(311 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 67 1e-11
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 67 1e-11
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 67 1e-11
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 67 1e-11
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 66 3e-11
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 4e-06
X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for ... 31 0.72
M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein. 31 0.72
BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein. 31 0.72
BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein. 31 0.72
BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein. 31 0.72
BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein. 31 0.72
AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2... 31 0.72
AB208914-1|BAD92151.1| 1278|Homo sapiens 1-phosphatidylinositol-... 31 0.72
M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human phospholi... 30 1.3
DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma ... 30 1.3
AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma ... 30 1.3
AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma ... 30 1.3
AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein p... 30 1.3
BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 3.8
AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like en... 29 3.8
AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 3.8
AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein ... 29 3.8
AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein. 29 3.8
X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein. 28 6.7
J02958-1|AAA59591.1| 1408|Homo sapiens MET protein. 28 6.7
DQ535164-1|ABG38462.1| 129|Homo sapiens immunglobulin heavy cha... 28 6.7
DQ535163-1|ABG38461.1| 129|Homo sapiens immunglobulin heavy cha... 28 6.7
DQ535162-1|ABG38460.1| 129|Homo sapiens immunglobulin heavy cha... 28 6.7
DQ535153-1|ABG38455.1| 129|Homo sapiens immunglobulin heavy cha... 28 6.7
BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene (hep... 28 6.7
AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor prot... 28 6.7
AC002080-1|AAB54047.1| 754|Homo sapiens receptor protein tyrosi... 28 6.7
AB067285-1|BAC02322.1| 119|Homo sapiens immunoglobulin heavy ch... 28 6.7
AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane hel... 28 6.7
BC114220-1|AAI14221.1| 1703|Homo sapiens BCOR protein protein. 27 8.8
AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long ... 27 8.8
AK093636-1|BAC04208.1| 470|Homo sapiens protein ( Homo sapiens ... 27 8.8
AK074286-1|BAB85037.1| 1139|Homo sapiens protein ( Homo sapiens ... 27 8.8
AJ347275-1|CAC87218.1| 79|Homo sapiens immunoglobulin heavy ch... 27 8.8
AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein. 27 8.8
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 11 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 190
D KG VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRAS
Sbjct: 56 DGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRAS 115
Query: 191 AILRSQRPI 217
AILRSQ+P+
Sbjct: 116 AILRSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 11 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 190
D KG VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRAS
Sbjct: 56 DGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRAS 115
Query: 191 AILRSQRPI 217
AILRSQ+P+
Sbjct: 116 AILRSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 11 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 190
D KG VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRAS
Sbjct: 56 DGKGVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRAS 115
Query: 191 AILRSQRPI 217
AILRSQ+P+
Sbjct: 116 AILRSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 11 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 190
D KG VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRAS
Sbjct: 56 DGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRAS 115
Query: 191 AILRSQRPI 217
AILRSQ+P+
Sbjct: 116 AILRSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 11 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 190
D KG VV K+ RKPA + +R AR +L ++ +++ N YR DL A +RRAS
Sbjct: 56 DGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRAS 115
Query: 191 AILRSQRPI 217
AILR+Q+P+
Sbjct: 116 AILRTQKPV 124
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 77 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 217
+R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for
phospholipase C. ).
Length = 1252
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein.
Length = 1252
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2
protein.
Length = 1252
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 346 IRCLRMGCRCIELDCWDGPDG 366
>AB208914-1|BAD92151.1| 1278|Homo sapiens
1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma 2 variant protein.
Length = 1278
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
++ +R+GC C+ L C+DGP G
Sbjct: 359 IRCLRMGCRCIELDCWDGPDG 379
>M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human
phospholipase C-gamma mRNA, complete cds. ).
Length = 1290
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 256 IRLGCGCLSLFCFDGPLG 203
+R+GC C+ L C+DGP G
Sbjct: 357 LRMGCRCIELDCWDGPDG 374
>DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1291
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 256 IRLGCGCLSLFCFDGPLG 203
+R+GC C+ L C+DGP G
Sbjct: 357 LRMGCRCIELDCWDGPDG 374
>AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1290
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 256 IRLGCGCLSLFCFDGPLG 203
+R+GC C+ L C+DGP G
Sbjct: 357 LRMGCRCIELDCWDGPDG 374
>AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1291
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 256 IRLGCGCLSLFCFDGPLG 203
+R+GC C+ L C+DGP G
Sbjct: 357 LRMGCRCIELDCWDGPDG 374
>AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein
protein.
Length = 1412
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 256 IRLGCGCLSLFCFDGPLG 203
+R+GC C+ L C+DGP G
Sbjct: 479 LRMGCRCIELDCWDGPDG 496
>BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 83 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 193
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 83 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 193
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 83 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 193
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein
SH3GLB2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 83 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 193
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein.
Length = 445
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 83 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 193
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 186 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 222
>X54559-1|CAB56793.1| 1390|Homo sapiens proto-oncogene protein.
Length = 1390
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 79 PPSIQ-GWCQEVTVQSEEVVKG 141
PP +Q GWC + V+SEE + G
Sbjct: 533 PPFVQCGWCHDKCVRSEECLSG 554
>J02958-1|AAA59591.1| 1408|Homo sapiens MET protein.
Length = 1408
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 79 PPSIQ-GWCQEVTVQSEEVVKG 141
PP +Q GWC + V+SEE + G
Sbjct: 533 PPFVQCGWCHDKCVRSEECLSG 554
>DQ535164-1|ABG38462.1| 129|Homo sapiens immunglobulin heavy chain
variable region protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSG 62
LH+V+ PPG LEW A F G
Sbjct: 35 LHWVRQPPGKGLEWVAVIWFDG 56
>DQ535163-1|ABG38461.1| 129|Homo sapiens immunglobulin heavy chain
variable region protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSG 62
LH+V+ PPG LEW A F G
Sbjct: 35 LHWVRQPPGKGLEWVAVIWFDG 56
>DQ535162-1|ABG38460.1| 129|Homo sapiens immunglobulin heavy chain
variable region protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSG 62
LH+V+ PPG LEW A F G
Sbjct: 35 LHWVRQPPGKGLEWVAVIWFDG 56
>DQ535153-1|ABG38455.1| 129|Homo sapiens immunglobulin heavy chain
variable region protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSG 62
LH+V+ PPG LEW A F G
Sbjct: 35 LHWVRQPPGKGLEWVAVIWFDG 56
>BC130420-1|AAI30421.1| 1390|Homo sapiens met proto-oncogene
(hepatocyte growth factor receptor) protein.
Length = 1390
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 79 PPSIQ-GWCQEVTVQSEEVVKG 141
PP +Q GWC + V+SEE + G
Sbjct: 533 PPFVQCGWCHDKCVRSEECLSG 554
>AF399514-1|AAK94999.1| 217|Homo sapiens olfactory receptor
protein.
Length = 217
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 78 SAVHSRLVPGGHCTK*RGC*RLTTTAQTYARLPFVVLQPSSA 203
+ +H R V G G LT A Y L F+ L+PSS+
Sbjct: 157 AVIHMRSVEGSRRAASTGGSHLTAVAMMYGTLIFMYLRPSSS 198
>AC002080-1|AAB54047.1| 754|Homo sapiens receptor protein tyrosine
kinase protein.
Length = 754
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 79 PPSIQ-GWCQEVTVQSEEVVKG 141
PP +Q GWC + V+SEE + G
Sbjct: 533 PPFVQCGWCHDKCVRSEECLSG 554
>AB067285-1|BAC02322.1| 119|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 119
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 130 PLHFVQ*PPGTSLEWTAD*VFSGLS 56
PLH+V+ PG LEW A + G++
Sbjct: 33 PLHWVRQAPGKGLEWVAIISYDGIN 57
>AB065725-1|BAC05946.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 78 SAVHSRLVPGGHCTK*RGC*RLTTTAQTYARLPFVVLQPSSA 203
+ +H R V G G LT A Y L F+ L+PSS+
Sbjct: 228 AVIHMRSVEGSRRAASTGGSHLTAVAMMYGTLIFMYLRPSSS 269
>BC114220-1|AAI14221.1| 1703|Homo sapiens BCOR protein protein.
Length = 1703
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 189 QPSSAP--RGPSKQKRLRQPQPSRIIC 263
QPS AP R P+KQ+++++ Q + ++C
Sbjct: 1256 QPSCAPASRPPAKQQKIKENQKTDVLC 1282
>AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long
isoform protein.
Length = 1755
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 189 QPSSAP--RGPSKQKRLRQPQPSRIIC 263
QPS AP R P+KQ+++++ Q + ++C
Sbjct: 1308 QPSCAPASRPPAKQQKIKENQKTDVLC 1334
>AK093636-1|BAC04208.1| 470|Homo sapiens protein ( Homo sapiens
cDNA FLJ36317 fis, clone THYMU2005283, highly similar to
Homo sapiens mRNA for immunoglobulin lambda heavy chain.
).
Length = 470
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSG 62
+H+V+ PPG LEW A F G
Sbjct: 53 VHWVRQPPGKGLEWVAAMSFDG 74
>AK074286-1|BAB85037.1| 1139|Homo sapiens protein ( Homo sapiens cDNA
FLJ23706 fis, clone HEP11450, highly similar to Homo
sapiens BCL-6 corepressor (BCOR) mRNA. ).
Length = 1139
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 189 QPSSAP--RGPSKQKRLRQPQPSRIIC 263
QPS AP R P+KQ+++++ Q + ++C
Sbjct: 1040 QPSCAPASRPPAKQQKIKENQKTDVLC 1066
>AJ347275-1|CAC87218.1| 79|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 79
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 127 LHFVQ*PPGTSLEWTAD*VFSGLSGSLCF 41
+H+V+ PPG LEW A SG + C+
Sbjct: 1 MHWVRQPPGKGLEWVAS--ISGDGNNECY 27
>AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein.
Length = 1721
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +3
Query: 189 QPSSAP--RGPSKQKRLRQPQPSRIIC 263
QPS AP R P+KQ+++++ Q + ++C
Sbjct: 1274 QPSCAPASRPPAKQQKIKENQKTDVLC 1300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,280,276
Number of Sequences: 237096
Number of extensions: 823881
Number of successful extensions: 9025
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 8974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9025
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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