Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30041
(311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 29 0.90
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 26 6.4
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 26 6.4
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 26 6.4
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 26 6.4
Z77663-5|CAB01215.1| 365|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 25 8.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 25 8.4
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 25 8.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 25 8.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 25 8.4
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 28.7 bits (61), Expect = 0.90
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 147 TTAQTYARLPFVVLQPSSAPRGPSKQKRLRQPQP 248
+T T R P ++ PSS P GPSK + P P
Sbjct: 213 STIPTNRRAPMLIA-PSSTPAGPSKPTARKPPTP 245
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDGPLG 203
Q++ GC C+ L C+DG G
Sbjct: 945 QVLLTGCRCVELDCWDGDDG 964
>Z77663-5|CAB01215.1| 365|Caenorhabditis elegans Hypothetical
protein F53F4.6 protein.
Length = 365
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 145 PLPHRPMQGYPSSCFSHPPLPEAHQSKKG*DSRN 246
PL H P+ Y S+ SH P P +QS++ RN
Sbjct: 110 PLHHFPVNQYSSASSSHHP-PTINQSQQQIYQRN 142
>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
protein T01E8.3 protein.
Length = 1299
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q + +GC C+ L C+DG
Sbjct: 336 QALLMGCRCIELDCWDG 352
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q++ GC C+ L C+DG
Sbjct: 373 QVLLSGCRCIELDCWDG 389
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q++ GC C+ L C+DG
Sbjct: 375 QVLLSGCRCIELDCWDG 391
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q++ GC C+ L C+DG
Sbjct: 375 QVLLSGCRCIELDCWDG 391
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q++ GC C+ L C+DG
Sbjct: 375 QVLLSGCRCIELDCWDG 391
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 262 QIIRLGCGCLSLFCFDG 212
Q++ GC C+ L C+DG
Sbjct: 375 QVLLSGCRCIELDCWDG 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,191,770
Number of Sequences: 27780
Number of extensions: 113308
Number of successful extensions: 259
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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