Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30038
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 269 RVREQKHTVLRDHGRPLCQQD 331
           RV  Q    LR H R LCQ D
Sbjct: 159 RVSAQMKADLRSHFRALCQDD 179


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 663 VVDLLDTSIVASQIKIRMVRQIYNGLLSC 577
           + DL+       Q K+R   ++++ LLSC
Sbjct: 73  IFDLISFKDSDLQQKLRYFEEVFSSLLSC 101


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 663 VVDLLDTSIVASQIKIRMVRQIYNGLLSC 577
           + DL+       Q K+R   ++++ LLSC
Sbjct: 73  IFDLISFKDSDLQQKLRYFEEVFSSLLSC 101


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 117 LSEILNIQSH-HVYYSKRMIQAAIKQLRKQSYVLYAFI 7
           L +  ++ SH  V + K   +   KQL K+SY++ +F+
Sbjct: 116 LIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSYLIISFV 153


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 117 LSEILNIQSH-HVYYSKRMIQAAIKQLRKQSYVLYAFI 7
           L +  ++ SH  V + K   +   KQL K+SY++ +F+
Sbjct: 116 LIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSYLIISFV 153


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 171 SXRHXVWGYDTVNSGTGQIRN 233
           S RH  W    +N G  Q +N
Sbjct: 356 SNRHSAWQSHWLNKGAEQAKN 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,010
Number of Sequences: 336
Number of extensions: 3484
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)