Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30038
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   1.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   3.0  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   5.2  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   9.0  

>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +2

Query: 200 YSQFRYRTNTESPVTLFWV*RTRRVREQKHTVLR 301
           Y Q   R NT++P    W+   ++++E + T ++
Sbjct: 330 YQQLEERGNTDNPDVARWLEWRKKIKEYRMTAMK 363


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +2

Query: 413 NGFNKANWNSTVDG--TKVIFSYLSK 484
           N FN ANW +  D   +K + SYL K
Sbjct: 648 NAFNTANWQAIADALQSKNVPSYLMK 673


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 428  ANWNSTVDGTKVIFSYLSKDGEEGYPG 508
            A W+  +DG       L  D ++GYPG
Sbjct: 1806 AGWDGVLDGIINEEDCLPPDNDKGYPG 1832


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 266 RRVREQKHTVLRDHGRPLCQQDRRTKFSID 355
           RR++EQ H + +D+  P     R+ K + D
Sbjct: 30  RRIKEQLHQLEQDNESPTHMYRRKLKIASD 59


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 106 PQHSKSPCLLFKTNDSSGHKTIKKTI 29
           P H K  C  F   +SSG    KK I
Sbjct: 82  PGHKKRDCKEFLNRESSGEGEKKKKI 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,757
Number of Sequences: 2352
Number of extensions: 14063
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)