Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30035
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.1  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 509 NMDLSTLGGRFRLRSSMYNLINTFYS*KK 595
           N D+ T   +  +   M  +INTFYS K+
Sbjct: 7   NGDVETFAFQAEIAQLMSLIINTFYSNKE 35


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 68  GHQVHAQWKVVN 33
           GH +HAQ  VVN
Sbjct: 327 GHHIHAQHHVVN 338


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 75  IRRTPSARTVESRQRSLSSYP 13
           I RTP    +  R+R L  YP
Sbjct: 48  IMRTPEQMFLADRERGLKYYP 68


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 259 RTRIPVWSLSAPAHDNILLMRI 194
           R  +PV ++S    DNILL  +
Sbjct: 660 RNMLPVRNVSVDVRDNILLKNL 681


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 75  IRRTPSARTVESRQRSLSSYP 13
           I RTP    +  R+R L  YP
Sbjct: 48  IMRTPEQLFLAERERGLKYYP 68


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 76  YSSDTKCTHSGKSSTVALFLPKS 8
           Y+ D  CTH      +++  P+S
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPES 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,012
Number of Sequences: 336
Number of extensions: 2308
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)