Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30030
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029575-1|AAH29575.1|  166|Homo sapiens transmembrane protein 3...    29   3.0  
AL049610-10|CAI42164.1|  168|Homo sapiens transmembrane protein ...    29   3.0  

>BC029575-1|AAH29575.1|  166|Homo sapiens transmembrane protein 31
           protein.
          Length = 166

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 13  ILHLFKIKSIMYFLKYFIVVLVALSLMI 96
           ILHLF + S +YF K+F+  +++LS  I
Sbjct: 124 ILHLFAL-STLYFYKFFLPTILSLSFFI 150


>AL049610-10|CAI42164.1|  168|Homo sapiens transmembrane protein 31
           protein.
          Length = 168

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 13  ILHLFKIKSIMYFLKYFIVVLVALSLMI 96
           ILHLF + S +YF K+F+  +++LS  I
Sbjct: 124 ILHLFAL-STLYFYKFFLPTILSLSFFI 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,522,900
Number of Sequences: 237096
Number of extensions: 749732
Number of successful extensions: 1823
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)