Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30030
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15004-1|AAC46492.1|  631|Drosophila melanogaster IRBP protein.        29   1.6  
U05208-1|AAA20644.1|  631|Drosophila melanogaster yolk protein f...    29   1.6  
M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.    28   3.7  
BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p pro...    28   3.7  
AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB...    28   3.7  
AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA...    28   3.7  
X67219-1|CAA47659.1|  597|Drosophila melanogaster Rop protein.         27   4.9  
X67218-1|CAA47658.1|  597|Drosophila melanogaster Rop protein.         27   4.9  
U15967-2|AAB60242.1|  597|Drosophila melanogaster Rop protein.         27   4.9  
AY052094-1|AAK93518.1|  597|Drosophila melanogaster SD04216p pro...    27   4.9  
AE014296-773|AAF47844.1|  597|Drosophila melanogaster CG15811-PA...    27   4.9  

>U15004-1|AAC46492.1|  631|Drosophila melanogaster IRBP protein.
          Length = 631

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 RRVGKLLPKALKFSPQREQPMKSIATCVTVG 232
           +R+ KLLP    F+P+ E P K  A   T G
Sbjct: 534 KRIEKLLPDYEMFAPEAEPPKKRAAKSTTAG 564


>U05208-1|AAA20644.1|  631|Drosophila melanogaster yolk protein
           factor 1 beta subunit protein.
          Length = 631

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 RRVGKLLPKALKFSPQREQPMKSIATCVTVG 232
           +R+ KLLP    F+P+ E P K  A   T G
Sbjct: 534 KRIEKLLPDYEMFAPEAEPPKKRAAKSTTAG 564


>M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.
          Length = 993

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -2

Query: 213 AIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLSTANHQ*QGYQYNNEILKEVHNGF 34
           A+  + C RCGE+F++ G     + +T      +S   +     G    N   KE HN  
Sbjct: 462 AMQILKCMRCGESFRSLGEMTKHMQETQHYTNILSQEQSISIKSGNANANSDAKESHNSL 521

Query: 33  YFE 25
             E
Sbjct: 522 SSE 524


>BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p
           protein.
          Length = 683

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -2

Query: 213 AIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLSTANHQ*QGYQYNNEILKEVHNGF 34
           A+  + C RCGE+F++ G     + +T      +S   +     G    N   KE HN  
Sbjct: 191 AMQILKCMRCGESFRSLGEMTKHMQETQHYTNILSQEQSISIKSGNANANSDAKESHNSL 250

Query: 33  YFE 25
             E
Sbjct: 251 SSE 253


>AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB,
           isoform B protein.
          Length = 885

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -2

Query: 213 AIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLSTANHQ*QGYQYNNEILKEVHNGF 34
           A+  + C RCGE+F++ G     + +T      +S   +     G    N   KE HN  
Sbjct: 393 AMQILKCMRCGESFRSLGEMTKHMQETQHYTNILSQEQSISIKSGNANANSDAKESHNSL 452

Query: 33  YFE 25
             E
Sbjct: 453 SSE 455


>AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA,
           isoform A protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -2

Query: 213 AIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLSTANHQ*QGYQYNNEILKEVHNGF 34
           A+  + C RCGE+F++ G     + +T      +S   +     G    N   KE HN  
Sbjct: 462 AMQILKCMRCGESFRSLGEMTKHMQETQHYTNILSQEQSISIKSGNANANSDAKESHNSL 521

Query: 33  YFE 25
             E
Sbjct: 522 SSE 524


>X67219-1|CAA47659.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 146 PFFRLLTGIFGSACPLQIINDRATSTT---MKYLRKYIMDFILNKCKMFSV 3
           P +R     F   CP ++ ND   S     +K L++  + F+  +C++FS+
Sbjct: 108 PMYRYAHVFFTEVCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSL 158


>X67218-1|CAA47658.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 146 PFFRLLTGIFGSACPLQIINDRATSTT---MKYLRKYIMDFILNKCKMFSV 3
           P +R     F   CP ++ ND   S     +K L++  + F+  +C++FS+
Sbjct: 108 PMYRYAHVFFTEVCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSL 158


>U15967-2|AAB60242.1|  597|Drosophila melanogaster Rop protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 146 PFFRLLTGIFGSACPLQIINDRATSTT---MKYLRKYIMDFILNKCKMFSV 3
           P +R     F   CP ++ ND   S     +K L++  + F+  +C++FS+
Sbjct: 108 PMYRYAHVFFTEVCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSL 158


>AY052094-1|AAK93518.1|  597|Drosophila melanogaster SD04216p
           protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 146 PFFRLLTGIFGSACPLQIINDRATSTT---MKYLRKYIMDFILNKCKMFSV 3
           P +R     F   CP ++ ND   S     +K L++  + F+  +C++FS+
Sbjct: 108 PMYRYAHVFFTEVCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSL 158


>AE014296-773|AAF47844.1|  597|Drosophila melanogaster CG15811-PA
           protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 146 PFFRLLTGIFGSACPLQIINDRATSTT---MKYLRKYIMDFILNKCKMFSV 3
           P +R     F   CP ++ ND   S     +K L++  + F+  +C++FS+
Sbjct: 108 PMYRYAHVFFTEVCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSL 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,012,806
Number of Sequences: 53049
Number of extensions: 230641
Number of successful extensions: 425
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)