Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30027
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   1.5  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   1.5  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   1.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   6.2  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   6.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   8.2  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 387 KIYIV*WTQNMRAVRLSDPATFTVSLSRD 473
           K+  V +  N +A R  DP +  ++LSRD
Sbjct: 265 KLIFVGYADNHKAFRFVDPTSNKITLSRD 293


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 387 KIYIV*WTQNMRAVRLSDPATFTVSLSRD 473
           K+  V +  N +A R  DP +  ++LSRD
Sbjct: 35  KLMFVGYADNHKAFRFVDPTSNKITLSRD 63


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 387 KIYIV*WTQNMRAVRLSDPATFTVSLSRD 473
           K+  V +  N +A R  DP +  ++LSRD
Sbjct: 35  KLMFVGYADNHKAFRFVDPTSNKITLSRD 63


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 387 KIYIV*WTQNMRAVRLSDPATFTVSLSRD 473
           K+  V +  N +A R  DP +  ++LSRD
Sbjct: 35  KLIFVGYADNHKAFRFVDPTSNKITLSRD 63


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 493 YRPGARHHPRRRKLLETQQIIYKALPRP 576
           YRPGA+ +  +++  + QQ  YK  P P
Sbjct: 470 YRPGAKPNSGQQQQQQQQQQQYKLQPPP 497


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 74  SAQTKPQPALVSPCPSVFEYDTSIQHPGRWYGVIKLSSD 190
           + Q KP+P +V+P         S+   G+ Y   +L++D
Sbjct: 314 TTQNKPRPGIVAPTTIPTVPKKSLAEVGKVYDRCELAND 352


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 80  QTKPQPALVSPCPSVFEYDTSIQHPGRWYGVIKLSSDY--TMHSLWLNIHLDN 232
           Q KP P+L++PC  +          G    +I L  +   T H+L L   L N
Sbjct: 50  QPKPAPSLMTPCMVIVMLSYIFGCVGNLMALIHLWRNVRNTKHALMLKCLLTN 102


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 513 PSSEEEASRNSTNHIQSTTKAGVESNSTK 599
           PSSE   S +    ++S+  A  E++STK
Sbjct: 427 PSSETNGSSSQERGMESSDDAKSETSSTK 455


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 513 PSSEEEASRNSTNHIQSTTKAGVESNSTK 599
           PSSE   S +    ++S+  A  E++STK
Sbjct: 427 PSSETNGSSSQERGMESSDDAKSETSSTK 455


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 80  QTKPQPALVSPCPSVFEYDTS 142
           ++ PQPA+  P P VF   +S
Sbjct: 46  ESSPQPAMYYPHPHVFHPQSS 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,040
Number of Sequences: 2352
Number of extensions: 15559
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)