Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30027
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF038623-8|AAB94160.2|  631|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z77655-8|CAB01138.3|  402|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical
           protein F25H9.3 protein.
          Length = 352

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 27  YHLRVVSLHCCSYCWCQLKRSRSPRWCLRAPVSSNTTQAYSIRVD 161
           Y++ + S H  +YC C  K    P   +  P+SS T   Y+   D
Sbjct: 175 YNVSLHSFHYSTYCKCTTKNCNDPEAPIPYPISSPTVSCYTSGYD 219


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = +3

Query: 483 WMSLPTGCSPPSSEEEASRNSTNHIQSTTKAGVESNSTKKIE----NTDVEDF 629
           W+S+  G  PP +   A +++   I S +K GVE    KK E    + D++D+
Sbjct: 162 WISMSIGAVPPPTSSAAEKDA---ISSLSKNGVEQEQEKKHEICSRDDDIDDY 211


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = +3

Query: 483 WMSLPTGCSPPSSEEEASRNSTNHIQSTTKAGVESNSTKKIE----NTDVEDF 629
           W+S+  G  PP +   A +++   I S +K GVE    KK E    + D++D+
Sbjct: 129 WISMSIGAVPPPTSSAAEKDA---ISSLSKNGVEQEQEKKHEICSRDDDIDDY 178


>Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical
           protein T04H1.1 protein.
          Length = 377

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +1

Query: 280 IFEFMINRTDFVINPGEVKKVQF-----YVEYKVTLAPPKVKYILFN 405
           + +F I +T F+I+     ++ F     Y+  KVT   P+ K ++FN
Sbjct: 197 VLKFTIEQTGFIISITNFAQIPFKLLAAYISDKVTFISPRTKMLIFN 243


>AF038623-8|AAB94160.2|  631|Caenorhabditis elegans Hypothetical
           protein T08B6.4 protein.
          Length = 631

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 38  SCIPSLLLILLVSAQTKPQPALVSP 112
           S +PSLLLI  V+AQ  P PA  +P
Sbjct: 7   SLLPSLLLICHVAAQPPPAPAPPAP 31


>Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical
           protein F32B4.8 protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/62 (22%), Positives = 30/62 (48%)
 Frame = +3

Query: 405 WTQNMRAVRLSDPATFTVSLSRD*YDWMSLPTGCSPPSSEEEASRNSTNHIQSTTKAGVE 584
           W QN+  +   +P    +S+ ++  +  ++P   SP  S+EE      +  +S+++  V 
Sbjct: 14  WAQNLTDMIAQNPLLAKMSMFQEYQENSTIPLPSSPEDSDEEDFIKKMSTKRSSSREAVS 73

Query: 585 SN 590
            N
Sbjct: 74  DN 75


>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
           protein Y51B11A.1 protein.
          Length = 1079

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 498 TGCSPPSSEEEASRNSTNHIQSTTKAGVESNSTKKIENT 614
           T   PPSS     + +T     TT+    S+ST  ++NT
Sbjct: 337 TSTEPPSSSTTPVQTTTTTAPETTRTEPPSSSTTPVQNT 375


>Z77655-8|CAB01138.3|  402|Caenorhabditis elegans Hypothetical
           protein C56A3.8a protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 348 KLYFLHFAGVDYEIRSVDHKFEYVLLRHAS*EFLNASE*LSRCMF--NHNEC 199
           +L F     VDY IR+ D   + +L+RH   E +N +   +   F   H EC
Sbjct: 198 QLLFQKMCIVDYVIRNTDRHMDNLLVRHVPGEEINLAAIDNGLAFPVRHPEC 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,111,347
Number of Sequences: 27780
Number of extensions: 332921
Number of successful extensions: 890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)