Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30024
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.2  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.2  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -1

Query: 279 LFQIRLTGSELTGSA*ENLLTLALARAMI--CSIYHWINFIIIRVTFENVT 133
           +F +     +LT S  + L T+ L    I   S+Y W  FI+ ++TF  VT
Sbjct: 16  IFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIW--FILTQMTFSGVT 64


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -1

Query: 279 LFQIRLTGSELTGSA*ENLLTLALARAMI--CSIYHWINFIIIRVTFENVT 133
           +F +     +LT S  + L T+ L    I   S+Y W  FI+ ++TF  VT
Sbjct: 16  IFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIW--FILTQMTFSGVT 64


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 465 NCIISKRTNFTGECL 509
           NC+ + RTNFT + L
Sbjct: 251 NCLNTGRTNFTNKQL 265


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 465 NCIISKRTNFTGECL 509
           NC+ + RTNFT + L
Sbjct: 40  NCLNTGRTNFTNKQL 54


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 465 NCIISKRTNFTGECL 509
           NC+ + RTNFT + L
Sbjct: 40  NCLNTGRTNFTNKQL 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,316
Number of Sequences: 336
Number of extensions: 3024
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)