Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30017
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    25   0.42 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.9  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 328 TLRSVYHSSKGKPKYKVLSSCPLN--NFEEYVEQQVEL 435
           TL   + SSK K  Y ++S C  N  +F +  EQ VE+
Sbjct: 90  TLSPAFTSSKIKNMYSLISECAENFVDFFQGREQDVEI 127


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 296 WVNFQKNLQF*P*DQFTTAVKENQNT 373
           W+   + + F   D+FT  +K+ QNT
Sbjct: 515 WLFRDQKIMFIELDKFTVNLKQGQNT 540


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 42   LFLIKPWGTFHYRKCIHLLFLW 107
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 42   LFLIKPWGTFHYRKCIHLLFLW 107
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 42   LFLIKPWGTFHYRKCIHLLFLW 107
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 42   LFLIKPWGTFHYRKCIHLLFLW 107
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 270 LSLDFNSRIGSISRKISNFDLK 335
           LSLD N  +GS+    S  D+K
Sbjct: 8   LSLDQNLSMGSLGAPQSPLDMK 29


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 292 ELGQFPEKSPILTLRSVYH 348
           E+G+FP   P++  R + H
Sbjct: 120 EVGRFPGLDPVVKRRLLQH 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,721
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)