Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30017
         (532 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622...    29   2.3  
06_03_1397 - 29861108-29861206,29861683-29861748,29862066-298621...    29   3.1  
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580...    29   3.1  
12_01_0002 - 4477-6144,6571-7440                                       27   9.4  
11_01_0003 - 6099-7766,8193-9062                                       27   9.4  

>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
            30062391-30062464,30062547-30062629,30063044-30063147,
            30063526-30063665,30063736-30063783,30063939-30063991,
            30064178-30064262,30064346-30064412,30064496-30064606,
            30065262-30065283,30066244-30071110,30071186-30071374,
            30071463-30071577,30072329-30073388,30074247-30074694,
            30074966-30075019,30075105-30076898,30076989-30077949,
            30078271-30078384,30078459-30078613,30078934-30079026,
            30079341-30079613,30093423-30093975,30094465-30094540,
            30094619-30094718
          Length = 4025

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/29 (37%), Positives = 23/29 (79%)
 Frame = +2

Query: 149  HDVLVNEKLKRDLLAFLVVKYEGAILEHD 235
            H +  ++++++++L  L +KYEGA+L+HD
Sbjct: 1661 HPLSSSDEMEKEMLT-LNIKYEGALLKHD 1688


>06_03_1397 -
           29861108-29861206,29861683-29861748,29862066-29862155,
           29862604-29862652,29862820-29862950,29863989-29864087,
           29864169-29864204,29864467-29864557,29864814-29864994,
           29865063-29865150,29865222-29865335
          Length = 347

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 259 EINDFHWILTVELGQFPEKSPILTLRSVYH-SSKGKPKYKVLSSCPLNNF 405
           E +  H+++ +   QFP+  P+LTL S  H +++G P    + S P+N++
Sbjct: 290 EADPVHFVIPL---QFPKHQPVLTLESSQHFNAQGLP----IMSAPVNDY 332


>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
            27159169-27159397,27159506-27159634,27159725-27159838,
            27160059-27160258,27160301-27160599,27160713-27160923,
            27161017-27161172,27161290-27161447,27161532-27161724,
            27162015-27162406,27162537-27162717,27162802-27163031,
            27163108-27163753,27163833-27163902,27163994-27164244
          Length = 1860

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 470  LLVTDPLHSFLNNSTCCSTYSSKLF--NGQEERTLYFGFP 357
            LLV +PL +FL+    C    S+++  NG +E  L   FP
Sbjct: 978  LLVNNPLDNFLDGPDSCEKILSEIYETNGSKEAVLNVLFP 1017


>12_01_0002 - 4477-6144,6571-7440
          Length = 845

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = +1

Query: 307 PEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQVELFKNECKGSVTSSQL 477
           P++ P L L    HS     + KV+ +    + +E   +Q    K++C    T S +
Sbjct: 427 PQRPPKLLLSVSAHSDAAASQVKVIPAATTKDDDEEQPEQTRKKKHQCPRQTTRSTM 483


>11_01_0003 - 6099-7766,8193-9062
          Length = 845

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = +1

Query: 307 PEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQVELFKNECKGSVTSSQL 477
           P++ P L L    HS     + KV+ +    + +E   +Q    K++C    T S +
Sbjct: 427 PQRPPKLLLSVSAHSDAAASQVKVIPAATTKDDDEEQPEQTRKKKHQCPRQTTRSTM 483


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,405,514
Number of Sequences: 37544
Number of extensions: 247831
Number of successful extensions: 527
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)