Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30017
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF068709-1|AAQ91906.1|  449|Caenorhabditis elegans Hypothetical ...    29   2.1  
AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical...    29   2.7  
AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.       27   6.3  
AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation...    27   6.3  
U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical p...    27   8.4  
U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical p...    27   8.4  

>U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical
           protein F32E10.1 protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 331 LRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQVELFKNE 447
           +  ++H   G P   + ++CPLN+F  +    +  F NE
Sbjct: 294 MMKLWHEEDGSPMAAIENTCPLNDFCRFPNSGMFFFANE 332


>AF068709-1|AAQ91906.1|  449|Caenorhabditis elegans Hypothetical
           protein C24B9.3b protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = +1

Query: 271 FHWILTVELGQFPEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQVELFKNEC 450
           F+W+      QFP  +P+  L S+  S        V+     N +++   +Q+  F    
Sbjct: 22  FYWLHASRAQQFPNYTPLKNLSSLISSHSNVESDIVIVVDASNAYDQVTFEQIRTFLLNF 81

Query: 451 KGSVTSSQLVS 483
             S+T S L S
Sbjct: 82  VSSLTVSPLDS 92


>AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical
           protein Y73F8A.17 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 160 KYIVYLSVQQFGNHRYIIHKNSRW 89
           +Y+V LS+Q+F N RY   KN +W
Sbjct: 52  RYVVLLSIQKFDNIRYGF-KNGKW 74


>AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 304 FPEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQV 429
           +PEK P +++  V+H+    P  + + S  L +  E +EQ V
Sbjct: 151 YPEKLPTVSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVV 192


>AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation
           related protein 7 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 304 FPEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQV 429
           +PEK P +++  V+H+    P  + + S  L +  E +EQ V
Sbjct: 151 YPEKLPTVSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVV 192


>U00043-11|AAN65290.1|  641|Caenorhabditis elegans Hypothetical
           protein T26A5.2b protein.
          Length = 641

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 256 FEINDFHWILTVELGQFPEKSPILTLRSVYHSSKGKPKYKVLSSCPLN 399
           FE++   + +  +L  F E     +L +   S  GKP   V+ SCP++
Sbjct: 322 FELSKAFYYVDFDLAHFVESDHCYSLLNA-KSVNGKPDETVVKSCPID 368


>U00043-10|AAC77505.1|  779|Caenorhabditis elegans Hypothetical
           protein T26A5.2a protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 256 FEINDFHWILTVELGQFPEKSPILTLRSVYHSSKGKPKYKVLSSCPLN 399
           FE++   + +  +L  F E     +L +   S  GKP   V+ SCP++
Sbjct: 460 FELSKAFYYVDFDLAHFVESDHCYSLLNA-KSVNGKPDETVVKSCPID 506


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,977
Number of Sequences: 27780
Number of extensions: 254386
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)