Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30014
(383 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 84 3e-17
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 3e-13
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 60 6e-10
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 41 3e-04
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.32
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.98
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_8472| Best HMM Match : TatC (HMM E-Value=1.4) 27 4.0
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 27 4.0
SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 27 6.9
SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1) 27 6.9
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 26 9.2
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 26 9.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 26 9.2
SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10) 26 9.2
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 26 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 84.2 bits (199), Expect = 3e-17
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
+K+KIS+ DK+ ILDKC + +KWLD+NQ A+K+E+E+ QKELE + NPIITK+YQ
Sbjct: 560 VKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 70.9 bits (166), Expect = 3e-13
Identities = 27/55 (49%), Positives = 43/55 (78%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
+K+K+S+ +++ ++ +C T+ WL+ NQ A+KEE + QKELEG+ NPIITK+YQ
Sbjct: 652 VKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 60.1 bits (139), Expect = 6e-10
Identities = 23/54 (42%), Positives = 40/54 (74%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 162
L+ K+S SDK T+ +K + + WL+ N LA+KEE+E ++KEL+ + +PI+ K++
Sbjct: 559 LEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 144
K+S+ DK+TI + I W+D NQ A E+++ ++++ + +Y+P
Sbjct: 1257 KLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 KEKISDSDKQTILDKCNDTIKW-LDSNQLADKEEYEHKQKELEGIYNPIITKM 159
K K DK+ L + T+K+ LD +LA KE++ +KE EG + TKM
Sbjct: 108 KHKRDLRDKEQELSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMDTKM 159
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 49 CNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKM 159
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 49 CNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKM 159
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 772 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 809
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 29.5 bits (63), Expect = 0.98
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Frame = +1
Query: 4 KEKISDSDKQTILDKCNDTIKWLDSN------QLADK-EEYEHKQKELEGI 135
K + + D + +++C TIK LDSN Q+AD+ EE + ++ELE +
Sbjct: 183 KTRKAQDDCEKEVNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELESV 233
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/68 (30%), Positives = 25/68 (36%)
Frame = -2
Query: 229 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAHTPPCRPAGWNPAT*WCRC 50
HL +RVL P P L LS C CLP+ +C H + P C
Sbjct: 1140 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVHLSVRVLSPVCPRVFTCLY 1195
Query: 49 TCRGWSAC 26
C S C
Sbjct: 1196 ACVNLSVC 1203
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 229 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAH 104
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1177 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1214
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 4 KEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 117
+EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1693 REKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
Frame = +1
Query: 7 EKISDSDKQTILDKCNDTIKWL--------DSNQLADKEEYEHKQKEL 126
E I S+ +L+ C D + W+ DS+ ++KEE E +++EL
Sbjct: 705 EGIDVSELLEVLEPCGDAVLWIRIQSMDAEDSSSDSEKEEEEEEEEEL 752
>SB_8472| Best HMM Match : TatC (HMM E-Value=1.4)
Length = 476
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 119 KNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVP 232
KN+ ++ L R P+E ++ SR PEP P
Sbjct: 8 KNFDEVVVQLLMRMYEPPDEGSDIATFSRESDPEPNPP 45
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 203 RAEHPEPEVPPPGLEALAHHR 265
+A H +P VPPP +E HHR
Sbjct: 263 KAHHSDPAVPPP-IEHRPHHR 282
>SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 104 MSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASR 205
+ T+++N + IR LR+C P E RASR
Sbjct: 6 VETTQRNTRRQNIRSLRKCRNAPVEQKGCRRASR 39
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 129
+KE + +++++ KC +T K LD+++ D+E+ E Q+E E
Sbjct: 1081 MKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 166 PGTSS*LSDCKCLPILSACAHTPPCRPAG 80
PGT + KC+ +L C P C PAG
Sbjct: 2968 PGTYQCADNRKCISVLEVCDGIPSC-PAG 2995
>SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1)
Length = 630
Score = 26.6 bits (56), Expect = 6.9
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 362 GSIFIYFNQGEVTRWLLQVGLSVVWN 285
G+ +Y G+ +WL +VG+ W+
Sbjct: 604 GNRIVYVTSGKYLKWLPEVGIDASWD 629
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +2
Query: 77 PTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPP 235
P S+P S S S+K W+ L+R ++ E P PP
Sbjct: 45 PVSFPAASSQSISQKPWQQSPTSTLQRTSQTNNELSNALNTHPKRWPPVNTPP 97
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 61 IKWLDSNQLADKEEYEHKQKELEGIYNPIITK 156
++W D D EY+ + ++E N ++TK
Sbjct: 805 MQWKDKMSQKDSMEYKQTRSKIESAINNVVTK 836
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 209 EHPEPEVPPPGLEALAHHRGGRLNQ 283
E P+ + PPPG+E H +NQ
Sbjct: 1034 ETPDIKTPPPGVEPANHRLAVEINQ 1058
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 64 KWLDSNQLADKEEYEHKQKELEGIYNPIITKM 159
KW SN A E+E+K KE++ Y I ++
Sbjct: 760 KWSKSNVDAPYSEFENKMKEIKDHYEREIERL 791
>SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 170 PEESPEVCRASRAEHPEPEVPP-PGLEALAHHRG 268
PE+ PEV P P +PP P E + H G
Sbjct: 256 PEQPPEVAGLVPPHQPAPGIPPQPMNEGNSDHHG 289
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +2
Query: 161 TRVPEESPEVCRA-----SRAEHPEPEVPPPGLEALAHH 262
TR+P+ESPE R + P P PPP +++ +H
Sbjct: 187 TRMPDESPEPTRPPPPLDDLDDLPPPPPPPPEDDSIHNH 225
>SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10)
Length = 1118
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHK 114
+KEK+S+ ++ I+ K + W+ S L DK + K
Sbjct: 365 VKEKLSEMEQDGIIVKEEEHTPWVSSMLLVDKRREKGK 402
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 215 PEPEVPPPGLEALAHHRG 268
P P+ PP LE ++ HRG
Sbjct: 332 PRPDYPPSSLETVSLHRG 349
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,712,423
Number of Sequences: 59808
Number of extensions: 203850
Number of successful extensions: 791
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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