Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30014
(383 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 87 5e-18
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 77 4e-15
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 53 8e-08
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 50 4e-07
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 50 4e-07
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 48 2e-06
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 48 2e-06
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 28 2.0
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 2.0
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 3.4
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 27 3.4
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 4.5
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 4.5
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 86.6 bits (205), Expect = 5e-18
Identities = 36/55 (65%), Positives = 48/55 (87%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
LK+KIS DK+ I DKC++ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 559 LKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 77.0 bits (181), Expect = 4e-15
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
LK+KIS DK+ I DKC++ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 559 LKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
K+S D + ++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 560 KLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
K+S D + ++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 560 KLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 52.8 bits (121), Expect = 8e-08
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 13 ISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
+S D + D DT++W++ N LADK+E E K KEL+ I I+TKM+Q
Sbjct: 561 LSAEDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 50.4 bits (115), Expect = 4e-07
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 162
K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 218 KLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 50.4 bits (115), Expect = 4e-07
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 162
K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 587 KLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
K+ + DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 10 KISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 165
K+ + DK+TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 LKEKISDSDK-QTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 126
L +K+S++++ Q +D D IKW+D + E+Y E+
Sbjct: 174 LHKKLSENERFQKFVDNAEDLIKWMDDKEKEICEKYSKMDFEV 216
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 152 RRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAHHRGGRLN 280
R P +P RA + EP PP L HH GG+L+
Sbjct: 181 RATASTPPPAPPAARAQSPKREEPLEPPTDL---IHHGGGQLD 220
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 152 RRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAHHRGGRLN 280
R P +P RA + EP PP L HH GG+L+
Sbjct: 541 RATASTPPPAPPAARAQSPKREEPLEPPTDL---IHHGGGQLD 580
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 57 HHQVAGFQPAGRQGGV*AQAERIGRHLQSDNYEDVPGCRRSPRR 188
H V G G+ +Q +I + + NY+ +P CR +PRR
Sbjct: 18 HLPVQGPSTIASSNGLRSQQSKIIKRPPT-NYKSIPACRLAPRR 60
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 1 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPII 150
L +++S+ QT+ + KW+ QLAD E K + EG+ P++
Sbjct: 45 LIDRLSECGFQTVETTSFVSPKWVP--QLADHNEIVKKHRRFEGVSYPVL 92
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 25 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 156
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 25 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITK 156
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 40 LDKCNDTIKWLDSNQLADKEEYEHKQKELEGI 135
L KC++ IK L + LAD+ + E +K+L +
Sbjct: 1023 LKKCSEGIKELKESMLADRLKVEDIEKKLAAL 1054
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 92 TRRSMSTSRKNWKAFT 139
T SM+ R+NWKAFT
Sbjct: 200 TELSMAPHRRNWKAFT 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,651,372
Number of Sequences: 27780
Number of extensions: 144483
Number of successful extensions: 594
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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