Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30013
(335 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.025
SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 31 0.23
SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_6472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_33701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 1.2
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_6812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28) 27 2.9
SB_47913| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 3.8
SB_27822| Best HMM Match : DUF1165 (HMM E-Value=7.6) 27 3.8
SB_12074| Best HMM Match : APC8 (HMM E-Value=0.7) 27 3.8
SB_58058| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 27 5.0
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_11269| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 26 6.6
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_26152| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_23765| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.6
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 26 8.7
SB_39545| Best HMM Match : TolA (HMM E-Value=0.12) 26 8.7
SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8) 26 8.7
>SB_41266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 288 RRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSP 112
R Q P STT E +SSTD EP + + + +RD R NR R P
Sbjct: 180 RHPRHSQQTETPETQSTTETSETQSSTDTREPVNNRDTRETVNNRDTRDTVNNRDTRDP 238
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -3
Query: 297 ITWRRAESQQIAARPALPST--TPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR* 124
IT E+Q P ST T E +S+TD +P + + + +RD R N
Sbjct: 71 ITTETPETQSTTDTPETQSTITTETPETQSTTDTRDPVNNRDTRDPINNRDTRDPVNNTD 130
Query: 123 HRSP 112
R P
Sbjct: 131 TRDP 134
>SB_6398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -3
Query: 279 ESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSP 112
E+Q A P STT E +S+TD + + + + +RD R NR R P
Sbjct: 100 ETQSTTATPETQSTTQTPETQSTTDTRDTVNNRDTRDPVNNRDTRDAVNNRDTRDP 155
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -3
Query: 279 ESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSP 112
E+Q P STT ++ ++ D +P + + + +RD R NR R P
Sbjct: 109 ETQSTTQTPETQSTTDTRDTVNNRDTRDPVNNRDTRDAVNNRDTRDPVNNRDTRDP 164
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 255 PALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR 127
P STT E +S+T E + T+ + +RD R NR
Sbjct: 99 PETQSTTATPETQSTTQTPETQSTTDTRDTVNNRDTRDPVNNR 141
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -3
Query: 243 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWAS 94
S QER++ D + PRH EL PD+R D RV ++ R R P SK A+
Sbjct: 1453 SRVESQERQTMRD-TRPRHPDELRPDIR-HDIRVAQERREGR-PDSKDAT 1499
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 279 ESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSP 112
E+Q P STT E +S+TD +P + + + + D R NR R P
Sbjct: 156 ETQSPTQTPETQSTTTTPETQSTTDTRDPVNNNDTRDPVNNNDTRDPVNNRDTRDP 211
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -3
Query: 279 ESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSP 112
E+Q P STT ++ ++ D +P + + + +RD R N R P
Sbjct: 165 ETQSTTTTPETQSTTDTRDPVNNNDTRDPVNNNDTRDPVNNRDTRDPVNNTDTRDP 220
>SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -3
Query: 294 TWRRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRS 115
++R +Q P STT E +S+T+ E + T+ + +RD R NR R
Sbjct: 796 SYRLKFTQSTTETPETQSTTETPETQSTTETPENQSTTDTRDPVNNRDTRDPVNNRDTRD 855
Query: 114 P 112
P
Sbjct: 856 P 856
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 128 DSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDS 24
DS ++DP G+RR++ F E R V L+ D+
Sbjct: 101 DSPPIKDPPGVRRKIEEFTIEQRAVNKRRLDLLDT 135
>SB_6472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 246 PSTTPRQERKSSTDYSE-PRHRTELYPD-LRSRDARVKKKNR 127
P+T PR +R+S T S+ RH + L PD + R ++ NR
Sbjct: 8 PNTIPRSDRRSRTGISQRHRHTSSLTPDTMAGTHLREQQSNR 49
>SB_33701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDL----RSRDARVKK 136
A+PA+P+T +Q+++ P++ + PD+ R+R RV K
Sbjct: 923 AKPAMPTTHKQQQQEKQPSEKAPKNTAQDVPDVPAEQRTRSGRVVK 968
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = -3
Query: 288 RRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPR 109
RR+ S Q + P S +PR ++ + S +HR+ RSR R K+ RSPR
Sbjct: 246 RRSRSPQKSRSPQR-SRSPRSSKRYRSSRSHRKHRSHS----RSRSPRSKRS----RSPR 296
Query: 108 SKWASTSRLAF*MRNATS 55
+ S SR R+++S
Sbjct: 297 KRRRSKSRSPRRYRDSSS 314
Score = 27.5 bits (58), Expect = 2.9
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = -3
Query: 246 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWASTSRLAF*MR 67
PST R+ R S S ++ + RSR +R KK+R R RS+ SR R
Sbjct: 205 PSTDKRKSRSRSRSRSRSHRKSRKRSESRSR-SRSPKKSRSAR--RSRSPQKSRSPQRSR 261
Query: 66 NATSKVTLFRASRLSGLHSEH 4
+ S +R+SR H H
Sbjct: 262 SPRSS-KRYRSSRSHRKHRSH 281
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -3
Query: 297 ITWRRAESQQIAARPALPST--TPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR* 124
IT E+Q P ST T E +S+TD +P + + + +RD R N
Sbjct: 71 ITTETPETQSTTDTPETQSTITTETPETQSTTDTRDPVNNRDTRDPINNRDTRDPVNNTD 130
Query: 123 HRSP 112
R P
Sbjct: 131 TRDP 134
>SB_6812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 297 ITWRRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVK 139
+ W+ AE RPA TT + R +S R +E P R AR++
Sbjct: 109 LKWK-AEGGAFTERPATTDTTTQTTRATSQTIPTTRATSEAMPKTRGYRARIR 160
>SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28)
Length = 1159
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDL----RSRDARVKK 136
A+PA+P+T +Q+++ P + + PD+ R+R RV K
Sbjct: 1109 AKPAMPTTHKQQQQEKQPSDKAPENTAQDVPDVPAEQRTRSGRVVK 1154
>SB_47913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDL--RSRDARVKKKNR 127
A+PA+P+T +Q+++ P + + PD+ R KK+ R
Sbjct: 172 AKPAMPTTHKQQQQEKQPSEKAPENTAQGVPDVPAEQRTRSAKKRYR 218
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 303 GRITWRRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR* 124
G + + E + +P ++ PR + KS S+ +HR R R R KKK R
Sbjct: 823 GSTSSSKDECESTKEKPEKHTSRPRHDSKSDKKNSDDKHR-------RHRRRREKKKQRH 875
Query: 123 H 121
H
Sbjct: 876 H 876
>SB_27822| Best HMM Match : DUF1165 (HMM E-Value=7.6)
Length = 167
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 273 QQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDAR 145
+Q+ P + TP + SS+ SEP H PDL A+
Sbjct: 25 RQLGETPYIYDRTPSRASSSSSSRSEPGHEYPDEPDLAESRAQ 67
>SB_12074| Best HMM Match : APC8 (HMM E-Value=0.7)
Length = 326
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 273 QQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDAR 145
+Q+ P + TP + SS+ SEP H PDL A+
Sbjct: 184 RQLGETPYIYDRTPSRASSSSSSRSEPGHEYPDEPDLAESRAQ 226
>SB_58058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPR 109
A+PA+P+T +Q+++ +P + P++ ++D V + + RS R
Sbjct: 318 AKPAMPTTHKQQQQQQQQQEKQPSKKA---PEITAQDGPVHQPEQRTRSGR 365
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 257 DLLYRAQHPARNGSRLQTIPSPD 189
D +R HP + S +QT+PS D
Sbjct: 175 DSAHRTDHPTQTESTVQTLPSTD 197
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK 136
A+P +P+T +Q+++ P + + P + +ARV++
Sbjct: 3250 AKPVMPTTHKQQQQEKQPSEKAPENAARMSPMSQRSNARVQE 3291
>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -3
Query: 300 RITWRRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVK 139
RIT + AA+P S + + D PRH+T D R + +
Sbjct: 14 RITKTSKPQDKQAAKPRQASRKTKTSKPQDRDKQAPRHKTSKPQDTRQASRKTE 67
>SB_11269| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 817
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRS 106
A PA+P P Y E + YP L ++ N RSPR+
Sbjct: 202 APPAIPPLPPSPSSPKQKRYEELLEKPGAYPTLPRKEETPHPVNTPARSPRN 253
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDL 163
A+PA+P+T +Q+++ P + + PD+
Sbjct: 736 AKPAMPTTNKQQQQEKQPSEKAPENTAQDVPDV 768
>SB_26152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1380
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 288 RRAESQQIAARPALPSTTPRQERKSSTDYSEPRHR 184
R+ + + RP+ PSTT R ++T HR
Sbjct: 1098 RKGHACGVMGRPSTPSTTKRSSYATATQKGNSTHR 1132
>SB_23765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -3
Query: 261 ARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWASTSR 85
A+PA+P+TT R+++ R + P + +ARV++ + RSK ++ R
Sbjct: 348 AKPAMPTTTSSSSRRNNLQRKPLRMLPRMSPMSQRSNARVQEGKA--ANSRSKVGASKR 404
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 26.2 bits (55), Expect = 6.6
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 267 IAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPRSKWASTS 88
+AA P P +TPRQ+R++ + ++ PR R R KK+ R S R ++
Sbjct: 102 LAASP--PVSTPRQQRRTPSSFT-PRSSIS-----RRRSDTPKKRRRISVSRRRAGSALG 153
Query: 87 RLAF*MRNATSKVTLFRASR 28
RL + + L A R
Sbjct: 154 RLTTKKKTPPRRTNLLEAFR 173
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 13 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFG 108
+EP + S C+F+SR+ T+RR PFG
Sbjct: 1 MEPAATPPSSSCEFSSRLL-----TKRRCPFG 27
>SB_39545| Best HMM Match : TolA (HMM E-Value=0.12)
Length = 1189
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -3
Query: 288 RRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKNR*HRSPR 109
R+ + + RP++PSTT R ++T R E + + + V+ + R + S +
Sbjct: 1051 RKGHACGVMGRPSMPSTTKRSSYATATQKGNSTGR-ENHRESYQTNGMVQDEARSNNSYK 1109
Query: 108 SKWA-STSRL 82
S+ + S+SRL
Sbjct: 1110 SRDSKSSSRL 1119
>SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8)
Length = 996
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -1
Query: 296 SPGAGLSLNRSQHDLLYRAQHPARNGSRLQTIPSPDIELSYIRTFGAVMH 147
+P A ++ ++ L+ +A HP +NG + + +P + S + A++H
Sbjct: 183 APNAEVTFPKNNSTLVLKALHPIKNGEVYRMV-TPLLRPSILGPTSAIVH 231
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,175,401
Number of Sequences: 59808
Number of extensions: 198019
Number of successful extensions: 855
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 473307974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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