Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30013
(335 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 0.75
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 0.75
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 0.99
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 1.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 2.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.0
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 4.0
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 4.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.3
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.4 bits (48), Expect = 0.75
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 218 FRSWRGVVLGRAGRAAIC*DSALRQVIRPR 307
F + G +L + R A DSA R +RPR
Sbjct: 591 FSAVYGALLTKTNRIARIFDSASRTAVRPR 620
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.4 bits (48), Expect = 0.75
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 218 FRSWRGVVLGRAGRAAIC*DSALRQVIRPR 307
F + G +L + R A DSA R +RPR
Sbjct: 681 FSAVYGALLTKTNRIARIFDSASRTAVRPR 710
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 0.99
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 228 GGVLCSVEQVVLRSVETQP 284
G V+CS+ Q ++ +ET P
Sbjct: 163 GSVVCSLPQTIVFHLETHP 181
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 1.7
Identities = 11/57 (19%), Positives = 26/57 (45%)
Frame = -3
Query: 306 LGRITWRRAESQQIAARPALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK 136
+GR + A + ++ P P PR ++++ +++ + E+ RD V +
Sbjct: 1840 VGRRSVGSARNIPVSGSPEPPPPPPRNHDQNNSSFNDSKESNEISEAECDRDQLVNR 1896
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 2.3
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 298 NHLAQG*VSTDRSTTCSTEHNTPPGTEVVYRLFRAPTSN*VISGPSEP 155
+ A G + D S ST+ +TP P ++ +GP+ P
Sbjct: 194 DEFANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATP 241
Score = 20.2 bits (40), Expect = 7.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 46 CDFTSRVSHSKRETRRRSP 102
CD V HS ++T+++ P
Sbjct: 1487 CDSKLIVDHSSQKTQQQQP 1505
Score = 19.8 bits (39), Expect = 9.2
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -3
Query: 234 PRQERKSSTDYSEPRHRTELYPDLRS 157
P+Q+++ + + + YPDL +
Sbjct: 1450 PQQQQQQQQQQQQQQQQLNHYPDLHN 1475
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 4.0
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = -3
Query: 240 TTPRQERKSST 208
TTP++ERK++T
Sbjct: 789 TTPKKERKTAT 799
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 107 DRGDRCYRFFFLTRAS 154
DRG + Y +FF R S
Sbjct: 469 DRGMKVYYYFFTQRTS 484
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 4.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 107 DRGDRCYRFFFLTRAS 154
DRG + Y +FF R S
Sbjct: 469 DRGMKVYYYFFTQRTS 484
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 5.3
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -3
Query: 234 PRQERKSSTDYSEPRHRTELYPD 166
PR+ R+ T+Y E R++ + + +
Sbjct: 405 PREMRQRITEYFEHRYQGKFFDE 427
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 5.3
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -3
Query: 234 PRQERKSSTDYSEPRHRTELYPD 166
PR+ R+ T+Y E R++ + + +
Sbjct: 373 PREMRQRITEYFEHRYQGKFFDE 395
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 5.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 227 RNGSRLQTIPSPDIEL 180
RNG+ L+T+ P+I +
Sbjct: 346 RNGADLETLNEPEIRV 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,699
Number of Sequences: 438
Number of extensions: 1694
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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