Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30012
         (485 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g06340.1 68416.m00731 DNAJ heat shock N-terminal domain-conta...    31   0.41 
At2g37840.2 68415.m04646 protein kinase family protein contains ...    28   2.9  
At2g37840.1 68415.m04645 protein kinase family protein contains ...    28   2.9  
At2g33060.1 68415.m04054 leucine-rich repeat family protein cont...    27   5.1  
At2g11810.1 68415.m01269 1,2-diacylglycerol 3-beta-galactosyltra...    27   6.7  
At4g32300.1 68417.m04596 lectin protein kinase family protein co...    27   8.9  

>At3g06340.1 68416.m00731 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam profile PF00226
           DnaJ domain
          Length = 673

 Score = 31.1 bits (67), Expect = 0.41
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 405 EFDNIHKYMCFEIGEIEFQTLVYTQRRGLPSYIHLI-KIKIPQWFLNW 265
           +FD + +  CF+ G+I     VY +  G+P +  LI K+  P + L +
Sbjct: 437 DFDKLREKSCFQAGQI---WAVYDEEEGMPRFYALIKKVTTPDFMLRY 481


>At2g37840.2 68415.m04646 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 596

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -2

Query: 103 GNSETAGNQITYLVQLLMFLII 38
           G++E AGNQ +  V+LL+FL++
Sbjct: 517 GDTENAGNQYSKAVRLLVFLLV 538


>At2g37840.1 68415.m04645 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 733

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -2

Query: 103 GNSETAGNQITYLVQLLMFLII 38
           G++E AGNQ +  V+LL+FL++
Sbjct: 654 GDTENAGNQYSKAVRLLVFLLV 675


>At2g33060.1 68415.m04054 leucine-rich repeat family protein
           contains leucine rich-repeat domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Hcr2-0B
           [Lycopersicon esculentum] gi|3894387|gb|AAC78593
          Length = 808

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 396 NIHKYMCFEIGEIEFQTLV--YTQRRGLPSYIHLIKIKIPQWFLNWKTIHKSEIY 238
           N+   +    G IEF T++   T+   +    + IK K+P+WF N   + +  ++
Sbjct: 293 NLENLVLLSCGLIEFPTILKNLTKLEHIDLSNNKIKGKVPEWFWNLPRLRRVNLF 347


>At2g11810.1 68415.m01269 1,2-diacylglycerol
           3-beta-galactosyltransferase, putative /
           monogalactosyldiacylglycerol synthase, putative / MGDG
           synthase, putative identical to
           monogalactosyldiacylglycerol synthase type C
           [gi:9927295] from Arabidopsis thaliana, similar to MGDG
           synthase type A [gi:9884651] from Glycine max
          Length = 465

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 309 IHLIKIKIPQWFLNWKTIHKSEIYAFI 229
           +H +   IP W + W+ +HK  I+  +
Sbjct: 181 VHPLMQHIPLWVMKWQGLHKKVIFVTV 207


>At4g32300.1 68417.m04596 lectin protein kinase family protein
           contains Pfam domains, PF01453: Lectin (probable mannose
           binding) and PF00069: Protein kinase domain
          Length = 821

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 351 QTLVYTQRRGLPSYIHLIKIKIPQWFLNWKTIHKSEIYAF 232
           Q+ V+T  RG   Y+       P+W  N+    KS++Y++
Sbjct: 647 QSHVFTTMRGTRGYL------APEWITNYAISEKSDVYSY 680


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,146,352
Number of Sequences: 28952
Number of extensions: 175856
Number of successful extensions: 307
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)