Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30011
         (413 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    64   5e-13
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          27   0.063
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      27   0.063
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.15 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.15 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.26 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.26 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.26 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 64.5 bits (150), Expect = 5e-13
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   SSFCGLKDKKYPDRRAMGFPFDR-PSXSATSLQDFILPNMGLQDITIQLQNVTEPNPRNP 178
           SS+CGL+D+KYPD RAMG+PFDR P     +L  F+  NM + ++T++  +   P  R+ 
Sbjct: 625 SSYCGLRDRKYPDARAMGYPFDRQPRAGVETLAQFLTGNMAVTEVTVRFSDTIVPRSRSG 684

Query: 179 PMS 187
            +S
Sbjct: 685 SIS 687


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 0.063
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFILPNMGLQDITI 139
           D +  GFP DRP  +     +F +PNM  +D+ I
Sbjct: 646 DDKVFGFPLDRPMWA----WNFTIPNMYFKDVFI 675


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 0.063
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFILPNMGLQDITI 139
           D +  GFP DRP  +     +F +PNM  +D+ I
Sbjct: 646 DDKVFGFPLDRPMWA----WNFTIPNMYFKDVFI 675


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFILPNMGLQDITIQLQNVTEPN 166
           D RAMGFP D+P          +L N+ ++++ +  + + E N
Sbjct: 642 DGRAMGFPLDKPVDPLL----LVLSNIHVKEVLVHHREMEELN 680


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFILPNMGLQDITIQLQNVTEPN 166
           D RAMGFP D+P          +L N+ ++++ +  + + E N
Sbjct: 642 DGRAMGFPLDKPVDPLL----LVLSNIHVKEVLVHHREMEELN 680


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 25.4 bits (53), Expect = 0.26
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 38   DRRAMGFPFDRPSXSATSLQDFILPNMGLQDITI 139
            D + +GFP DRP     SL    +PN+ ++D+ +
Sbjct: 969  DGKPLGFPLDRP----LSLGALSVPNIFVKDVLV 998


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.26
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFIL--PNMGLQDITI 139
           D+R+ GFP D+P      L DF    PNM  +DI I
Sbjct: 643 DKRSFGFPLDKP------LYDFNYEGPNMLFKDILI 672


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.26
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 38  DRRAMGFPFDRPSXSATSLQDFIL--PNMGLQDITI 139
           D+R+ GFP D+P      L DF    PNM  +DI I
Sbjct: 643 DKRSFGFPLDKP------LYDFNYEGPNMLFKDILI 672


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 61  VRSTLXQRXQPPGLHFTKHGLAGHHYSIA 147
           V+    Q   P      + G+ GHHY  A
Sbjct: 41  VQQQSQQAGDPCDPSLLRQGVPGHHYGAA 69


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 105 MKSWRLVALXEGRSNGNPIARLSGYFLSFNPQKL 4
           +KS   +   +   NG    R+  + + FNP K+
Sbjct: 155 LKSHNDIYCEKYEKNGETYLRIKKHAVKFNPAKV 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,151
Number of Sequences: 438
Number of extensions: 1913
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)