Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30009
(664 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 153 4e-36
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 148 1e-34
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 146 5e-34
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 136 6e-31
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 113 3e-24
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 113 4e-24
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 112 6e-24
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 105 9e-22
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 98 1e-19
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 83 4e-15
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 75 2e-12
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 68 2e-10
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 66 7e-10
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 62 9e-09
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 62 2e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 53 5e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 52 2e-05
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 47 4e-04
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.018
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.023
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 40 0.040
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 40 0.071
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 0.16
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 36 0.87
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 35 2.0
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 2.0
UniRef50_O05103 Cluster: HTH-type transcriptional regulator malR... 34 3.5
UniRef50_Q4A5U6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria gonor... 33 8.1
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 153 bits (371), Expect = 4e-36
Identities = 70/81 (86%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
TCQ+AYSRIEGD I CA H
Sbjct: 61 TCQIAYSRIEGDKILCAAYSH 81
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS 660
AMKGAVDGGLN+PHS KRFPGYDAESK FNAE HRAHIFG HVA+YM +
Sbjct: 131 AMKGAVDGGLNIPHSTKRFPGYDAESKTFNAEAHRAHIFGQHVADYMHA 179
Score = 60.5 bits (140), Expect(2) = 2e-13
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 416 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 502
EYNVE V+NGPGAFRCYLDVGL RTTTGA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGA 126
Score = 37.5 bits (83), Expect(2) = 2e-13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 254 LCAAYSHELPRYGVK 298
LCAAYSHELPRYGVK
Sbjct: 75 LCAAYSHELPRYGVK 89
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 148 bits (358), Expect = 1e-34
Identities = 68/81 (83%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 213 TCQVAYSRIEGDH-ICALLIH 272
T Q+AY+RIEGD +CA H
Sbjct: 61 TVQIAYARIEGDRVVCAAYSH 81
Score = 105 bits (252), Expect = 9e-22
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAYSHELP+YG++VGLTNYAAAY TG E+NVEP
Sbjct: 75 VCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEP 134
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
VD+GPGAFRC+LDVGLARTTTGA
Sbjct: 135 VDDGPGAFRCFLDVGLARTTTGA 157
Score = 99 bits (238), Expect = 5e-20
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS 660
GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRS
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRS 210
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 146 bits (353), Expect = 5e-34
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 4e-19
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 4e-17
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 136 bits (328), Expect = 6e-31
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 213 TCQVAYSRIEGDHICA 260
Q+AYS+IEGD + A
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+ +AYSHELPRYG+KVGLTNYAAAY+TG +YNVE
Sbjct: 75 VASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE 134
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
+ F+ LD+GLARTTTG+
Sbjct: 135 -EGDRAPFKAVLDIGLARTTTGS 156
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 517 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 654
MKG DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYM 207
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 113 bits (273), Expect = 3e-24
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 213 TCQVAYSRIEGDHICA 260
CQV Y+ ++GD + A
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/50 (48%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYM 654
A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM
Sbjct: 157 ALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYM 206
Score = 39.5 bits (88), Expect = 0.071
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG 337
+ AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 75 VAAAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 113 bits (272), Expect = 4e-24
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 213 TCQVAYSRIEGDHI 254
CQ+A S IEGD I
Sbjct: 61 ICQIASSHIEGDKI 74
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS 660
A+KGA DGGLN+PH RFPG +FN E R +I G+HVAEYM S
Sbjct: 165 ALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMAS 210
Score = 42.3 bits (95), Expect = 0.010
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYN 424
L A S EL RYG+ VGL NYAAAY+TG E
Sbjct: 75 LSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDG 134
Query: 425 VEPVDNGPGAFRCYLDVGLARTTTG 499
+ + + +LDVG+ RTTTG
Sbjct: 135 DKEEEGDRKPIKAFLDVGITRTTTG 159
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 112 bits (270), Expect = 6e-24
Identities = 46/74 (62%), Positives = 64/74 (86%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 213 TCQVAYSRIEGDHI 254
Q+ ++I GD +
Sbjct: 84 IAQIVQAKIVGDEV 97
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
G +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y++
Sbjct: 190 GVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLK 238
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 260 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 439
AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 100 AAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKK 159
Query: 440 NGPG------AFRCYLDVGLARTTTGA 502
+ G F+ LDVGLARTTTGA
Sbjct: 160 DDEGDDEERFPFKAILDVGLARTTTGA 186
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 105 bits (252), Expect = 9e-22
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 213 TCQVAYSRIEGDHICALLIHMSCHVMV*RLV*QIMLQHIQL 335
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +3
Query: 48 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 221
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 222 VAYSRIEGD-HICALLIH 272
V Y+ + GD ICA H
Sbjct: 73 VVYATLSGDVTICAAYSH 90
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 84 ICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQ 143
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
D F+C+LD GL RT+TGA
Sbjct: 144 GDEEARPFKCFLDTGLVRTSTGA 166
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEY 651
A+KGAVDGGL++PH+ KRF GYD + K + + +I G VAEY
Sbjct: 171 ALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEY 216
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 83.4 bits (197), Expect = 4e-15
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 45 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 224
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 225 AYSRIEGDH-ICALL 266
+ + GD +C L
Sbjct: 64 VVAELTGDKTVCQAL 78
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+C A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 74 VCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDE 130
Query: 434 VDNGPGAFRCYLDVGLARTTTGA 502
+ P F+ LDVGLARTTTGA
Sbjct: 131 ENRRP--FKVILDVGLARTTTGA 151
Score = 33.1 bits (72), Expect = 6.1
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 12/59 (20%)
Frame = +1
Query: 517 MKGAVDGGLNVPHSIKR----FPGYDAESKKFNAEV--------HRAHIFGLHVAEYMR 657
MKGAVDGGL +PH++ R F D ++ K +V ++ +I G VA+YMR
Sbjct: 157 MKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMR 215
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +3
Query: 84 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI-CA 260
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D + CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMR 657
G +KGA DGG+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+
Sbjct: 450 GVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMK 503
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/82 (37%), Positives = 38/82 (46%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
LCAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 364 LCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDE 423
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
F+ LD GL RTTTG
Sbjct: 424 DQKEKKPFKAILDAGLVRTTTG 445
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 125
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 60 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 239
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 240 EGDHI 254
+GD +
Sbjct: 64 DGDRV 68
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGA D GLNVPHS +F G+ + F+A+ IFG +++EYM+
Sbjct: 154 GALKGASDAGLNVPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMK 201
Score = 46.4 bits (105), Expect = 6e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 263 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 439
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 440 NGPGAFRCYLDVGLARTTTGA 502
A R +LD+GLAR+T GA
Sbjct: 130 GEKKAPRVFLDIGLARSTRGA 150
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYM 654
GA+KGA DGGL+VPHS KRFPGY + + ++A+ HR IFG HVA YM
Sbjct: 110 GALKGACDGGLHVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYM 160
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/80 (40%), Positives = 37/80 (46%)
Frame = +2
Query: 260 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 439
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 440 NGPGAFRCYLDVGLARTTTG 499
N F+ LDVG+ TTG
Sbjct: 86 NERRPFKALLDVGVKNVTTG 105
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 66.1 bits (154), Expect = 7e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 57 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 236
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 237 IEGDHI 254
++GD I
Sbjct: 69 VDGDFI 74
Score = 32.7 bits (71), Expect = 8.1
Identities = 13/48 (27%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 514 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHVAEYM 654
+MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+ +Y+
Sbjct: 148 SMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYI 193
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 62.5 bits (145), Expect = 9e-09
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 654
GA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 83 GALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTG 337
+CAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 25 VCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 61.7 bits (143), Expect = 2e-08
Identities = 45/131 (34%), Positives = 60/131 (45%)
Frame = +3
Query: 81 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHICA 260
+++F+R +EGKTDYYARKRL +QDKN+YNTP+ + + C
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXDDSSCNXQRYHLPDCIXKKFXSSVPC- 94
Query: 261 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 440
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 95 --MHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 441 MDQEHLDVIWM 473
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 53.2 bits (122), Expect = 5e-06
Identities = 21/50 (42%), Positives = 36/50 (72%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS 660
G +K A+DG LN+PH+ +RF G ++K+ +A+VHR I+G +V+ Y+ +
Sbjct: 74 GVLKEALDGSLNIPHNDRRFVGSSKDNKQLDAKVHRKSIYGGYVSAYIET 123
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 255 CA 260
A
Sbjct: 59 IA 60
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.5 bits (93), Expect = 0.018
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.1 bits (92), Expect = 0.023
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +3
Query: 75 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 255 CA 260
A
Sbjct: 59 LA 60
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 40.3 bits (90), Expect = 0.040
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 78 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 248
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 39.5 bits (88), Expect = 0.071
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 72 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 251
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 252 I 254
+
Sbjct: 58 V 58
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 206
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 207 DVTCQVAYSRIEGDHICA 260
+++ + +S + GD I A
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 35.9 bits (79), Expect = 0.87
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 254
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH+
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHV 54
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 586 ESKKFNAEVHRAHIFGLHVAEYM 654
+SK+ +AEVHR +I+G HVA YM
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYM 26
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 213 TCQVA 227
C +A
Sbjct: 161 QCSLA 165
>UniRef50_O05103 Cluster: HTH-type transcriptional regulator malR;
n=4; Clostridium|Rep: HTH-type transcriptional regulator
malR - Clostridium butyricum
Length = 335
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 508 LGAMKGAVDGGLNVPH--SIKRFPGYDAESKKFNAEV 612
LGA+K A+D GL+VP SI F G D ESK +N +
Sbjct: 254 LGAIKAAIDNGLDVPRDISIVGFDGMD-ESKYYNPSI 289
>UniRef50_Q4A5U6 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 667
Score = 32.7 bits (71), Expect = 8.1
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 371 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTNMVTFNPRVGHLACYIFVGET 192
Q+F A+ + + Q +LQ L ++ N+ TN +T N + L +F
Sbjct: 432 QIFLAIQTINSSQFKILQDALIQDQKNNTTIKANNETFTNELT-NKNLISLMADLFTNSI 490
Query: 191 HNQTIFRCVIF 159
HNQTI R F
Sbjct: 491 HNQTISRLSYF 501
>UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria
gonorrhoeae|Rep: TraG-like protein - Neisseria
gonorrhoeae
Length = 1138
Score = 32.7 bits (71), Expect = 8.1
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = -3
Query: 368 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTNMVTFNPRVGHLACYIFVGETH 189
+F V + + + NMLQ+N + N A K RT + N G++A +F G
Sbjct: 204 LFTNVSQIASRRGNMLQYNGKSKTMTCNEAAKELKDRTRFYSKNYLPGYIADRVFAGLGT 263
Query: 188 NQTIFRCVIFVLVLNNEAFTSIIISFPFTT 99
N V ++ L N +F ++ + F T
Sbjct: 264 NSAGINRVNALVTLGNSSFQYLLDNARFDT 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,886,212
Number of Sequences: 1657284
Number of extensions: 12925080
Number of successful extensions: 29795
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29765
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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