Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30009
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 146 8e-35
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 146 8e-35
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 146 8e-35
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 145 1e-34
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 97 7e-20
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 90 6e-18
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAA 325
+CAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 68 ICQIAYARIEGDMIVCAAYAH 88
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 82 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 141
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 142 IDGQPGAFTCYLDAGLARTTTG 163
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 168 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 216
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 145 bits (352), Expect = 1e-34
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCARYAH 81
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 209
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/82 (56%), Positives = 50/82 (60%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 25 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 84
Query: 434 VDNGPGAFRCYLDVGLARTTTG 499
+D PGAF CYLD GLARTTTG
Sbjct: 85 IDGQPGAFTCYLDAGLARTTTG 106
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +3
Query: 183 LIVRLSNKDVTCQVAYSRIEGDHI-CALLIH 272
+IVR++N+D+ CQ+AY+RIEGD I CA H
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAH 31
Score = 33.1 bits (72), Expect = 0.91
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPH 555
GA+KGAVDGGL++PH
Sbjct: 111 GALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 90.2 bits (214), Expect = 6e-18
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +1
Query: 511 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 657
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR
Sbjct: 9 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMR 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,462,914
Number of Sequences: 237096
Number of extensions: 2134083
Number of successful extensions: 3627
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3619
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -