Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30006
(628 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 75 1e-14
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 40 2e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 4e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.002
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.034
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 33 0.045
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 32 0.059
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.18
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.3
SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe... 27 2.2
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.9
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 27 2.9
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 2.9
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 26 5.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 74.5 bits (175), Expect = 1e-14
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +3
Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
S+ + VTT +G+ SYP DT+RRRMMM SG A + Y ++ C I EG +FFK
Sbjct: 235 SFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFK 291
Query: 201 GAFSNVLRGTGGAFVL 248
GA +N+LRG GA VL
Sbjct: 292 GAGANILRGVAGAGVL 307
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 99 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
M+++GR YK C+ A EG + ++G +NVLR
Sbjct: 61 MIRAGRLSHR--YKGIGECFKRTAAEEGVISLWRGNTANVLR 100
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 40.3 bits (90), Expect = 2e-04
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +3
Query: 60 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGA 239
++ PFD V+ R+ QS + +Y N + C I+K EG +AF+KG VL G
Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG---TVLPLLGIG 86
Query: 240 FVLVLMMRSRRSCK 281
F + + + CK
Sbjct: 87 FCVSIQFTTFEYCK 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 4e-04
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 30 IAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGA 206
IA T+ + G +S PFD ++ R+ A Y T+A+ EG +A +KG
Sbjct: 204 IAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGF 263
Query: 207 FSNVLR-GTGGAFVLVL 254
VLR G GG +LV+
Sbjct: 264 VPKVLRLGPGGGILLVV 280
Score = 38.7 bits (86), Expect = 7e-04
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 179
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 180 GTSAFFKGAFSNVL 221
G ++G +L
Sbjct: 60 GPHRLYRGILPPIL 73
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.5 bits (83), Expect = 0.002
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 42 VTTVAGIISY----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 209
V +VAGII+ P DTV+ RM QS A + YKN+IHC I +G F+ GA
Sbjct: 209 VGSVAGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGAT 264
Query: 210 SNVLR 224
+ R
Sbjct: 265 PRLAR 269
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 48 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 197
T++ PFD +++RM + S + YK+ +HC T+ + EG AF+
Sbjct: 125 TISDAFMTPFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.034
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 75 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
FDTV RM Q K+ LYKN I C ++EG A +KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
Score = 29.1 bits (62), Expect = 0.55
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 72 PFDTVRRRMMMQSGR--AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV 245
PF V+ RM S + YK+ + ++ I K G F GA + +LR G+ V
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSV 207
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 32.7 bits (71), Expect = 0.045
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
+++P D +RRR + YKN I KTEG + FF+G SN+L+
Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 32.3 bits (70), Expect = 0.059
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
I +P + +R R+ Q G + Y I C+ K EG +KG N+L+
Sbjct: 352 IVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLK 404
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.18
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 54 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
A I+ PFD ++ R+ ++ +YKN +H + EG F G F VLR
Sbjct: 224 ATAITNPFDMLKTRVQLEPH------IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 135 YKNTIHCWATIAKTEGTSAFFKGAFSNV 218
Y NT + I K EG +AF++G F ++
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPCC790.03 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 603 ITAAAQTM*CHIKKLIIFHFELRRDYI 523
+T T+ I LI++HF LR+DY+
Sbjct: 95 VTVIPYTLFPGIMHLIVYHFFLRKDYV 121
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 2.9
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +3
Query: 3 NTPIVISWAIAQTVTTV-AGIISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATI 167
N P + + +A V + A ++ P + ++ R+ +Q + +S+ Y + I
Sbjct: 106 NLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQI 165
Query: 168 AKTEGTSAFFKGAFSNVLR 224
AK EG FF G + +LR
Sbjct: 166 AKQEGMKTFFYGYRATILR 184
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 2.9
Identities = 22/86 (25%), Positives = 34/86 (39%)
Frame = +3
Query: 30 IAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 209
+A T V GI+ Y D + + Q +LY A +K + S K
Sbjct: 45 LANRKTDVVGIVGYKCDDTKNDLAEQEAYWNISVLYPIQT---ALFSKLQSVSQTLKP-- 99
Query: 210 SNVLRGTGGAFVLVLMMRSRRSCKSN 287
SN ++G + ++V R CK N
Sbjct: 100 SNTMQGDLISAIVVSFDLMARHCKKN 125
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 203
+SYPF+ RR+M + R KS + K + T K G FF G
Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 5.1
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 27 AIAQTVTTVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
AIA +T+ A + P V+ R+ + +SG+A Y+++I C + EG +K
Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223
Query: 201 GAFSNVLRGTG 233
G +++L G G
Sbjct: 224 GLSASLL-GVG 233
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,231,035
Number of Sequences: 5004
Number of extensions: 38443
Number of successful extensions: 96
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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