BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30006 (628 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 75 1e-14 SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 40 2e-04 SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 4e-04 SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.002 SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.002 SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.034 SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 33 0.045 SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 32 0.059 SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.18 SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.3 SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe... 27 2.2 SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.9 SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 27 2.9 SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 2.9 SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 26 5.1 >SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 322 Score = 74.5 bits (175), Expect = 1e-14 Identities = 37/76 (48%), Positives = 48/76 (63%) Frame = +3 Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200 S+ + VTT +G+ SYP DT+RRRMMM SG A + Y ++ C I EG +FFK Sbjct: 235 SFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFK 291 Query: 201 GAFSNVLRGTGGAFVL 248 GA +N+LRG GA VL Sbjct: 292 GAGANILRGVAGAGVL 307 Score = 25.4 bits (53), Expect = 6.8 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +3 Query: 99 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224 M+++GR YK C+ A EG + ++G +NVLR Sbjct: 61 MIRAGRLSHR--YKGIGECFKRTAAEEGVISLWRGNTANVLR 100 >SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats|Schizosaccharomyces pombe|chr 1|||Manual Length = 302 Score = 40.3 bits (90), Expect = 2e-04 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = +3 Query: 60 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGA 239 ++ PFD V+ R+ QS + +Y N + C I+K EG +AF+KG VL G Sbjct: 33 LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG---TVLPLLGIG 86 Query: 240 FVLVLMMRSRRSCK 281 F + + + CK Sbjct: 87 FCVSIQFTTFEYCK 100 >SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 298 Score = 39.5 bits (88), Expect = 4e-04 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Frame = +3 Query: 30 IAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGA 206 IA T+ + G +S PFD ++ R+ A Y T+A+ EG +A +KG Sbjct: 204 IAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGF 263 Query: 207 FSNVLR-GTGGAFVLVL 254 VLR G GG +LV+ Sbjct: 264 VPKVLRLGPGGGILLVV 280 Score = 38.7 bits (86), Expect = 7e-04 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = +3 Query: 3 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 179 N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59 Query: 180 GTSAFFKGAFSNVL 221 G ++G +L Sbjct: 60 GPHRLYRGILPPIL 73 >SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 291 Score = 37.5 bits (83), Expect = 0.002 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = +3 Query: 42 VTTVAGIISY----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 209 V +VAGII+ P DTV+ RM QS A + YKN+IHC I +G F+ GA Sbjct: 209 VGSVAGIITVYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGAT 264 Query: 210 SNVLR 224 + R Sbjct: 265 PRLAR 269 >SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 303 Score = 37.5 bits (83), Expect = 0.002 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +3 Query: 48 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 197 T++ PFD +++RM + S + YK+ +HC T+ + EG AF+ Sbjct: 125 TISDAFMTPFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168 >SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 320 Score = 33.1 bits (72), Expect = 0.034 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = +3 Query: 75 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224 FDTV RM Q K+ LYKN I C ++EG A +KG +++ R Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295 Score = 29.1 bits (62), Expect = 0.55 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 72 PFDTVRRRMMMQSGR--AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV 245 PF V+ RM S + YK+ + ++ I K G F GA + +LR G+ V Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSV 207 >SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 32.7 bits (71), Expect = 0.045 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224 +++P D +RRR + YKN I KTEG + FF+G SN+L+ Sbjct: 243 LTFPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295 >SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamily|Schizosaccharomyces pombe|chr 2|||Manual Length = 426 Score = 32.3 bits (70), Expect = 0.059 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +3 Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224 I +P + +R R+ Q G + Y I C+ K EG +KG N+L+ Sbjct: 352 IVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLK 404 >SPAC823.10c |||mitochondrial carrier with solute carrier repeats|Schizosaccharomyces pombe|chr 1|||Manual Length = 296 Score = 30.7 bits (66), Expect = 0.18 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +3 Query: 54 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224 A I+ PFD ++ R+ ++ +YKN +H + EG F G F VLR Sbjct: 224 ATAITNPFDMLKTRVQLEPH------IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274 >SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 371 Score = 27.9 bits (59), Expect = 1.3 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 135 YKNTIHCWATIAKTEGTSAFFKGAFSNV 218 Y NT + I K EG +AF++G F ++ Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSL 257 >SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe|chr 3|||Manual Length = 248 Score = 27.1 bits (57), Expect = 2.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -2 Query: 603 ITAAAQTM*CHIKKLIIFHFELRRDYI 523 +T T+ I LI++HF LR+DY+ Sbjct: 95 VTVIPYTLFPGIMHLIVYHFFLRKDYV 121 >SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 338 Score = 26.6 bits (56), Expect = 2.9 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Frame = +3 Query: 3 NTPIVISWAIAQTVTTV-AGIISYPFDTVRRRMMMQ----SGRAKSDILYKNTIHCWATI 167 N P + + +A V + A ++ P + ++ R+ +Q + +S+ Y + I Sbjct: 106 NLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQI 165 Query: 168 AKTEGTSAFFKGAFSNVLR 224 AK EG FF G + +LR Sbjct: 166 AKQEGMKTFFYGYRATILR 184 >SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces pombe|chr 2|||Manual Length = 695 Score = 26.6 bits (56), Expect = 2.9 Identities = 22/86 (25%), Positives = 34/86 (39%) Frame = +3 Query: 30 IAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 209 +A T V GI+ Y D + + Q +LY A +K + S K Sbjct: 45 LANRKTDVVGIVGYKCDDTKNDLAEQEAYWNISVLYPIQT---ALFSKLQSVSQTLKP-- 99 Query: 210 SNVLRGTGGAFVLVLMMRSRRSCKSN 287 SN ++G + ++V R CK N Sbjct: 100 SNTMQGDLISAIVVSFDLMARHCKKN 125 >SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 326 Score = 26.6 bits (56), Expect = 2.9 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 63 ISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 203 +SYPF+ RR+M + R KS + K + T K G FF G Sbjct: 253 VSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297 >SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 361 Score = 25.8 bits (54), Expect = 5.1 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = +3 Query: 27 AIAQTVTTVAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200 AIA +T+ A + P V+ R+ + +SG+A Y+++I C + EG +K Sbjct: 170 AIAGVITSAA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYK 223 Query: 201 GAFSNVLRGTG 233 G +++L G G Sbjct: 224 GLSASLL-GVG 233 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,231,035 Number of Sequences: 5004 Number of extensions: 38443 Number of successful extensions: 96 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 95 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 277683324 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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