Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30006
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 95 3e-20
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 73 1e-13
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 69 3e-12
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 66 2e-11
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 44 1e-04
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 43 2e-04
03_02_0646 + 10141967-10142476,10143721-10144254 43 2e-04
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 42 4e-04
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 42 5e-04
04_04_0048 + 22351788-22352177,22353175-22353711 39 0.004
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 38 0.007
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 38 0.007
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 36 0.020
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 36 0.035
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 35 0.046
09_04_0437 - 17587944-17588909 35 0.046
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 34 0.080
08_02_1016 - 23606089-23607072 34 0.080
09_04_0628 + 19093665-19094033,19094408-19094722 33 0.25
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 32 0.32
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 32 0.32
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 31 0.57
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 31 0.75
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 29 3.0
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 29 4.0
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 28 5.3
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 28 7.0
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 27 9.2
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 27 9.2
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 95.5 bits (227), Expect = 3e-20
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 3 NTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 182
++P+ W AQ VT++AG+ISYP DTVRRRMMMQSG +Y +T+ CW I K EG
Sbjct: 247 DSPLWQRWVTAQAVTSMAGLISYPLDTVRRRMMMQSGMDVQ--MYSSTLDCWRKIYKVEG 304
Query: 183 TSAFFKGAFSNVLRGTGGAFVLVL 254
+F++GA SN+ R TG A +LVL
Sbjct: 305 IKSFYRGALSNMFRSTGAAAILVL 328
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +3
Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
S+A+ +T AG+ SYP DTVRRRMMM SG A + YK+++ ++ I K EG + FK
Sbjct: 290 SFALGWLITNGAGLASYPIDTVRRRMMMTSGEA---VKYKSSMDAFSQILKNEGAKSLFK 346
Query: 201 GAFSNVLRGTGGAFVL 248
GA +N+LR GA VL
Sbjct: 347 GAGANILRAIAGAGVL 362
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +3
Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
S+A+ +TT +G +YPFDT+RRRMM+ SG+ + YKN H I TEG F+
Sbjct: 231 SFALGWAITTFSGACAYPFDTLRRRMMLTSGQ---PLKYKNAFHAAKQIVSTEGFFTLFR 287
Query: 201 GAFSNVLRGTGGAFVL 248
G +N+L G GA VL
Sbjct: 288 GVGANILSGMAGAGVL 303
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +3
Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
S+ + +T AG+ SYP DTVRRRMMM SG A + Y +++ + I EG + FK
Sbjct: 288 SFLLGWGITIGAGLASYPIDTVRRRMMMTSGEA---VKYNSSLDAFKQIVAKEGAKSLFK 344
Query: 201 GAFSNVLRGTGGAFVL 248
GA +N+LR GA VL
Sbjct: 345 GAGANILRAVAGAGVL 360
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 99 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
M++SGR YK C+ K EG A ++G +NV+R
Sbjct: 114 MIKSGRLSHP--YKGIADCFGRTIKDEGVIALWRGNTANVIR 153
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 54 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG 233
A II+YP + VR ++ Q + Y I C + + EG F++G +N+LR T
Sbjct: 233 ASIITYPHEVVRSKLQEQGRARHGAVHYTGVIDCIKQVYQKEGIPGFYRGCATNLLRTTP 292
Query: 234 GAFV 245
A +
Sbjct: 293 NAVI 296
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 51 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL-RG 227
+ G I+ P D ++ R+M+Q G+A Y+ I C TI + EG AF KG VL G
Sbjct: 201 ITGAITTPLDVLKTRLMVQ-GQANQ---YRGIISCAQTILREEGAGAFLKGIEPRVLWIG 256
Query: 228 TGGA-FVLVLMMRSRRSCKSNVRIVTII 308
GG+ F VL + N R V I+
Sbjct: 257 IGGSIFFGVLEKTKSILAERNSRKVRIL 284
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +3
Query: 48 TVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG 227
T I + PFD V+ R+M Q GR DI YK +H TI EG A +KG ++R
Sbjct: 262 TAGPICTGPFDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRI 319
Query: 228 TGGAFVL 248
G ++
Sbjct: 320 PPGQAIM 326
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGA 239
V+ R+ Q G + + YK IHC TI EG + GA V+R GT A
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 72 PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 203
P D ++ R+ + A Y+ HC T+ ++EG A +KG
Sbjct: 59 PIDVIKTRLQLDRSGA-----YRGIAHCGTTVVRSEGVRALWKG 97
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGA 239
I P D V+ RMM D YK+T+ C+A K +G AF+KG +N R G+
Sbjct: 227 IGSPVDVVKSRMM-------GDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCRIGSWNV 279
Query: 240 FVLVLMMRSRRSCKSNVRIVTI 305
+ + + + + K V + ++
Sbjct: 280 IMFLTLEQGKNGKKKEVLVSSL 301
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 69 YPFDTVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGT 230
+P D VR R + GR D+ Y+NT H TIA++EG + G + VL T
Sbjct: 34 HPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 54 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 203
A +S P D ++ RMM Q AK +LY+N+ C K EG +A +KG
Sbjct: 230 ATTLSCPADVIKTRMMNQGKDAK--VLYRNSYDCLVKTVKHEGLTALWKG 277
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +3
Query: 3 NTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 182
++P++IS A + I++P D VRRRM ++ ++ + + I +TE
Sbjct: 234 DSPVLISLACGSLSGIASSTITFPLDLVRRRMQLEGAAGRARVYQTGLFGTFGHIVRTES 293
Query: 183 TSAFFKG 203
++G
Sbjct: 294 LRGLYRG 300
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 54 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG 233
A ++YP D VR R+ Q K+ YK H +TI + EG +KG + +L G G
Sbjct: 126 AASVTYPLDVVRTRLATQ----KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLL-GVG 180
Query: 234 GAFVL 248
+ +
Sbjct: 181 PSIAI 185
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/96 (19%), Positives = 39/96 (40%)
Frame = +3
Query: 3 NTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 182
++P V+S + ++P D V+RRM +Q S + + I + EG
Sbjct: 204 DSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIFQKEG 263
Query: 183 TSAFFKGAFSNVLRGTGGAFVLVLMMRSRRSCKSNV 290
F++G L+ + + + +S S++
Sbjct: 264 LRGFYRGIVPEYLKVVPSVGIAFMTYETLKSLLSSI 299
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +3
Query: 12 IVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSA 191
I+ A + I+YP D VRR+M +Q+ + + K T A IAK +G
Sbjct: 242 IIAKLACGSVAGLLGQTITYPLDVVRRQMQVQAFSSSNLEKGKGTFGSIAMIAKHQGWRQ 301
Query: 192 FFKGAFSNVLR 224
F G N L+
Sbjct: 302 LFSGLSINYLK 312
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +3
Query: 48 TVAGIISYPFDTVRRRMMM---------QSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
T+ ++YP D +RRRM M +G K + Y I + + EG A +K
Sbjct: 261 TIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYK 320
Query: 201 GAFSNVLR 224
G N ++
Sbjct: 321 GLVPNSVK 328
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 9 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGR-AKSDILYKNTIHCWATIAKTEGT 185
P+V I T + + P D RM S A YKN H IA EG
Sbjct: 115 PLVQKAGIGLTAGAIGACVGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIAADEGV 174
Query: 186 SAFFKGAFSNVLR 224
A +KGA V+R
Sbjct: 175 LALWKGAGPTVVR 187
>09_04_0437 - 17587944-17588909
Length = 321
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 51 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGT 230
VA S P D V+ R+M A + Y + C ++EG A +KG V R
Sbjct: 240 VAASASTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTR-- 297
Query: 231 GGAFVLVLMM 260
G F +VL +
Sbjct: 298 QGPFTIVLFV 307
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
+ P D V+ RMM D Y +TI C+ K +G AF+KG N R
Sbjct: 233 VGSPVDVVKSRMM-------GDSAYTSTIDCFVKTLKNDGPLAFYKGFLPNFAR 279
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 54 AGIISYPFDTVRRRMMMQSG-RAKSDILYKNTIHCWATIAKTEGTSAFFKG 203
A + + P DT + R+ +Q A + Y+ + ATIA+ EG +A +KG
Sbjct: 26 AEVCTIPLDTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKG 76
>08_02_1016 - 23606089-23607072
Length = 327
Score = 34.3 bits (75), Expect = 0.080
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +3
Query: 51 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGT 230
VA S P D V+ R+M + Y I C ++EG A +KG V R
Sbjct: 246 VAAAASNPVDVVKTRVMNMKVAPGAPPPYSGAIDCALKTVRSEGVMALYKGFIPTVSR-- 303
Query: 231 GGAFVLVLMM 260
G F +VL +
Sbjct: 304 QGPFTVVLFV 313
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 146 GVLVQDIALGTTRLHHHAPTDCVEGIGDDTGDCGYG 39
G V+ +ALG LHHHAP D ++ G D + G
Sbjct: 8 GGAVEGLALGIAPLHHHAPCDDLKDDGGDAEEAEDG 43
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 132 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLMMRSR 269
+Y+N HC + TEG ++ +KG F+ R G A V+ + R
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLR 857
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 21 SWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFK 200
S A A T A ++ YP DTVRR+M M+ Y + I + +G ++
Sbjct: 288 SLATALLSATFATLMCYPLDTVRRQMQMKGSP------YNTVLDAIPGIVERDGLIGLYR 341
Query: 201 GAFSNVLR 224
G N L+
Sbjct: 342 GFVPNALK 349
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 30 IAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 203
I ++ ++P + R++M Q G +YKN H I + EG +KG
Sbjct: 330 IGSAAGAISSTATFPLEVARKQM--QVGAVGGRQVYKNVFHALYCIMENEGIGGLYKG 385
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 51 VAGIISY----PFDTVRRRMMMQS-GRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 215
VAG +S P +T+R +M+ S G + +++ + +I KTEG + F+G F N
Sbjct: 145 VAGAVSRTCVAPLETIRTHLMVGSNGDSMTEV--------FQSIMKTEGWTGLFRGNFVN 196
Query: 216 VLR 224
V+R
Sbjct: 197 VIR 199
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 45 TTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 197
T + + P DTV++R+ + S Y HC T+ + EG AFF
Sbjct: 148 TIASDAVFTPMDTVKQRLQLTSSP------YTGVSHCVRTVLRDEGLGAFF 192
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 15 VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAF 194
+IS IA V+ A P +T+R +M+ S +T + +I K EG +
Sbjct: 138 LISGGIAGAVSRTAVA---PLETIRTHLMVGSNG-------NSTAEVFQSIMKHEGWTGL 187
Query: 195 FKGAFSNVLR 224
F+G F NV+R
Sbjct: 188 FRGNFVNVIR 197
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 15 VISWAIAQTVTTVAG-IISYPFDTVRRRMMMQSGRAKSDI-LYKNTIHCWATIAKTEGTS 188
V+ +A TV A I+ +PFDT++ ++ Q A Y + TEG
Sbjct: 4 VVKDLVAGTVGGAANLIVGHPFDTIKVKLQSQPTPAPGQFPKYAGAVDAVKQTIATEGPR 63
Query: 189 AFFKG 203
+KG
Sbjct: 64 GLYKG 68
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGR---AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
++YP D VRR+M +Q+ + A + T A I + +G F G N ++
Sbjct: 250 LTYPLDVVRRQMQVQNKQPHNANDAFRIRGTFQGLALIIRCQGWRQLFAGLSLNYVK 306
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 15 VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIA-KTEGTSA 191
V+ W+IA +T +A I PF V R M G + N + W ++ ++ +
Sbjct: 255 VVWWSIATVLTPLAAKIGLPFLLV-MRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLAL 313
Query: 192 FFKGAFSNVLRGTGGAFVLVLMMR 263
+ G + + TG AF +L+ R
Sbjct: 314 VYSGMYLGSV--TGLAFSPLLISR 335
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 138 KNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
+N IA T+G F+KG F N+LR
Sbjct: 162 RNLFELIHAIATTQGLKGFWKGNFVNILR 190
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 63 ISYPFDTVRRRMMMQSGRAKSDI---LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 224
++YP D VRR+M +QS + + T I +T+G F G N ++
Sbjct: 247 LTYPLDVVRRQMQVQSQQYHDKFGGPQIRGTFQGLMIIKQTQGWRQLFAGLSLNYIK 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,386,088
Number of Sequences: 37544
Number of extensions: 244836
Number of successful extensions: 603
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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