Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30003
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 54 1e-07
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 54 1e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 41 8e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 41 8e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.27
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 32 0.35
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.61
U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70309-3|CAA94357.2| 358|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 4.3
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 7.6
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 54.0 bits (124), Expect = 1e-07
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 576 LRNCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 692
L C+++ +CTE M+ FP RM DWLF +M+++ +RREL
Sbjct: 132 LGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQ 508
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 54.0 bits (124), Expect = 1e-07
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3
Query: 576 LRNCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 692
L C+++ +CTE M+ FP RM DWLF +M+++ +RREL
Sbjct: 132 LGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQ 508
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQDAYAST 526
K C C + E+ A C C DCP YE + + VC T+ S+C + + + S
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 527 TLISA 541
+++A
Sbjct: 575 FVMTA 579
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
PC K+ C C + A C C C D R VC ET+ ++CE+ ++
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 421
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC C G+ C++ C C + C T + VC +T+ ++C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 342
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQDAYAST 526
K C C + E+ A C C DCP YE + + VC T+ S+C + + + S
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 527 TLISA 541
+++A
Sbjct: 583 FVMTA 587
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
PC K+ C C + A C C C D R VC ET+ ++CE+ ++
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 429
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC C G+ C++ C C + C T + VC +T+ ++C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 350
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 450 AWCAQTSTKPGNRIAKY 500
+ S+ P N I Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 450 AWCAQTSTKPGNRIAKY 500
+ S+ P N I Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYASTTLIS 538
CS G C G+ MC C D Y S C + C+ + + A + S
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCKTDMECSAAFSECSS 274
Query: 539 AVVRNTTTFK 568
R FK
Sbjct: 275 GGCRCKRGFK 284
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 459 AQTSTKP 479
T T P
Sbjct: 319 KSTPTTP 325
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 285 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 464
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 465 TSTKP 479
T T P
Sbjct: 207 TPTTP 211
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + MK T +T K+ +T + KST T T ++ PT T
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331
Query: 459 AQTSTKP 479
T T P
Sbjct: 332 KSTPTTP 338
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 443
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
>U50309-4|AAG24133.1| 267|Caenorhabditis elegans Hypothetical
protein F58G4.4 protein.
Length = 267
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTN--FNETWQSDCEVYRQDA 514
P + +C++G C +E C C ++ + VC + E + D V+ A
Sbjct: 138 PKCQYYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIGEFCEIDQTVFNHPA 197
Query: 515 YASTTLISAVV 547
++ L+ ++V
Sbjct: 198 DSAVVLMCSIV 208
>Z70309-3|CAA94357.2| 358|Caenorhabditis elegans Hypothetical
protein R102.3 protein.
Length = 358
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 612 FQCSQAFLGSSVILDLNVVVLRTTALIRVVEA*ASWRYTSQSDCQVSL 469
FQ +A L + ILD + +L+T + + E WR TS S +VSL
Sbjct: 87 FQRDEAMLLKNRILDASDEILKTNFMWNMFERSKKWRNTSHSS-EVSL 133
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 174 EQLGRGDISEAEHIEHGMSESLDEKRYMRQK*PELTTFSTRSLMKRMKT-KKSTWKTLA* 350
E++ + D E + G E+ ++K + +K P+ F +S T KKS K
Sbjct: 171 EEIAKED-DEGIDEDDGDEETPEQKTTIPKKKPK-NAFGGKSKKNNWGTRKKSKAKVSQV 228
Query: 351 KSTAAQDVSAKSTNTETPCVTASRTVPT 434
+ST+++ +S K P T R PT
Sbjct: 229 QSTSSEKISKKDQENARPRETKLRNTPT 256
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 493
C G E + HG + C K CP T+ +C + ++T QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 493
C G E + HG + C K CP T+ +C + ++T QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,711,017
Number of Sequences: 27780
Number of extensions: 316070
Number of successful extensions: 1153
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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