Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01056
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 102 3e-22
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 97 1e-20
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 94 1e-19
09_06_0359 + 22508900-22509439 87 2e-17
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 83 2e-16
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 82 4e-16
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 80 2e-15
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 77 2e-14
02_01_0160 + 1116160-1116678 77 2e-14
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 76 2e-14
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 75 4e-14
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 73 3e-13
10_01_0309 + 3417602-3418147 69 3e-12
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 62 5e-10
06_01_0214 + 1634171-1634173,1634263-1634742 59 3e-09
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 53 2e-07
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 50 1e-06
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 50 2e-06
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 49 4e-06
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 42 4e-04
01_01_0077 - 585670-585787,585921-586687 40 0.001
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 38 0.005
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.012
02_01_0086 + 613113-613532 36 0.021
08_02_0053 + 11721658-11721689,11721960-11722710 29 3.2
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 3.2
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 102 bits (244), Expect = 3e-22
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYG 180
VIGLFG+ VPKT +NF L +G GYKG FHR+IK+FMIQ RSIYG
Sbjct: 83 VIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYG 142
Query: 181 ERFEDENFKLKHYGAGWLSMANAG 252
E F+DENF LKH G G LSMANAG
Sbjct: 143 ECFDDENFTLKHTGPGVLSMANAG 166
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 255 DTNGSQFFITTVK 293
DTNGSQFFI TVK
Sbjct: 168 DTNGSQFFICTVK 180
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYG 180
VIGL+G VP+T ENF L +G GYKGS FHRVIK+FMIQ +SIYG
Sbjct: 103 VIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYG 162
Query: 181 ERFEDENFKLKHYGAGWLSMANAG 252
F+DENFKL H G G +SMANAG
Sbjct: 163 RTFKDENFKLVHTGPGVVSMANAG 186
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
+TNGSQFFI TVKTPWLDGRHVVFG+V+EGMD+V+ IE T DRP K VVIS+
Sbjct: 188 NTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISE 243
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/92 (53%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXX 159
V+GLFGKTVPKT ENF L +G G +KGS FHR+I +FMIQ
Sbjct: 68 VMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGR 127
Query: 160 XXRSIYGERFEDENFKLKHYGAGWLSMANAGK 255
SIYG +F DENFK+KH G G LSMANAG+
Sbjct: 128 GGESIYGTKFADENFKIKHTGPGLLSMANAGR 159
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = +3
Query: 252 QDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 425
+DTNGSQFFITTV T WLDG+HVVFGKVL GMDVV KIE + P VVI+D+
Sbjct: 159 RDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGS-PKSKVVIADS 215
>09_06_0359 + 22508900-22509439
Length = 179
Score = 86.6 bits (205), Expect = 2e-17
Identities = 48/91 (52%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXX 159
V+ LF TVPKT ENF L +G G YKGS FHR+I NFM Q
Sbjct: 23 VMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGT 82
Query: 160 XXRSIYGERFEDENFKLKHYGAGWLSMANAG 252
SIYG+RF DENFKL+H G G LSMANAG
Sbjct: 83 GGESIYGDRFADENFKLRHTGPGVLSMANAG 113
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
+TNGSQFFI T +T WLDG+HVVFGKV++G VV+K+E +G+ + V+I D
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGG-TAERVLIED 169
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 416
+TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ+IE T ND+P +DV I
Sbjct: 590 NTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQQIEKVKTDKNDKPYQDVKI 643
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERF 189
L+ + PKT ENF + Y FHRVIK FMIQ +SI+G F
Sbjct: 511 LYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ-TGDPLGDGTGGQSIWGREF 566
Query: 190 EDENFK-LKHYGAGWLSMANAG 252
EDE K L+H LSMANAG
Sbjct: 567 EDEFHKSLRHDRPFTLSMANAG 588
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/56 (62%), Positives = 45/56 (80%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
DTNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G +DRP+ D+VI D
Sbjct: 157 DTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVD 212
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/72 (45%), Positives = 36/72 (50%)
Frame = +1
Query: 85 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKTQM 264
KGS HR++K FM+Q SIYG FEDENF LKH G LSMANAG
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTN 159
Query: 265 DLNFSSQLLRHP 300
F R P
Sbjct: 160 GSQFFITTTRTP 171
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 79.8 bits (188), Expect = 2e-15
Identities = 44/92 (47%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXX 159
V+GLFG TVPKT ENF + +G G YKG+ FHR+I FMIQ
Sbjct: 57 VMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSGNGT 116
Query: 160 XXRSIYGERFEDENFKLKHYGAGWLSMANAGK 255
SIYG F DENFK+ H G LSMAN K
Sbjct: 117 GCDSIYGGMFPDENFKINHSAPGLLSMANYAK 148
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = +3
Query: 252 QDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 425
+DTNGSQFFITTVK LDG+HVVFGKVL GMDVV KIE + P V+ISD+
Sbjct: 148 KDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIE-AEGSQSGTPRSKVLISDS 204
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
+TNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G DRP DV I D
Sbjct: 175 NTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVD 230
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +1
Query: 85 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKTQM 264
+GS FHRVIK FM+Q SIYG +FEDENF LKH G LSMAN+G
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 265 DLNFSSQLLRHP 300
F R P
Sbjct: 178 GSQFFITTTRTP 189
>02_01_0160 + 1116160-1116678
Length = 172
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/91 (48%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXX 159
V+ L+ K VP+T ENF L +G G YKGS FHRVI FM Q
Sbjct: 21 VMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGT 80
Query: 160 XXRSIYGERFEDENFKLKHYGAGWLSMANAG 252
SIYGE+F DE FK KH G LSMANAG
Sbjct: 81 GGESIYGEKFADEVFKFKHDSPGILSMANAG 111
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
+TNGSQFFI TV WLDG+HVVFG+V+EGMDVV+ IE V K VVI+D
Sbjct: 113 NTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIE-KVGSRGGSTAKPVVIAD 167
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 425
D+NGSQF+ITT+KT WLDG HVVFG+V++GMD V IE N +P K VVI+D+
Sbjct: 126 DSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDS 182
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQ 129
VIGL+G VPKT NF L EG G YKGS+FHR+I FMIQ
Sbjct: 55 VIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQ 104
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 75.4 bits (177), Expect = 4e-14
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Frame = +1
Query: 10 LFGKTVPKTTENFFQLA---QKPEG--EGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSI 174
LF VPKT ENF Q + G +GYKG +FHRVIK+FMIQ SI
Sbjct: 57 LFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSI 116
Query: 175 YGERFEDENFKLKHYGAGWLSMANAG----KTQMDLNFSSQ 285
YG +F+DENF KH G G LSM + K + D+ SS+
Sbjct: 117 YGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLEQDIEASSK 157
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVVISD 422
QFFIT K WLD +HVVFG+VL +GM V+KIE TG N+RP VIS+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISE 251
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 72.5 bits (170), Expect = 3e-13
Identities = 44/92 (47%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXXXXXXXX 156
V LF P+T ENF L G G YKGS FHRVIK FM Q
Sbjct: 24 VFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDG 83
Query: 157 XXXRSIYGERFEDENFKLKHYGAGWLSMANAG 252
SIYG FEDENF L+H G LSMANAG
Sbjct: 84 SGGESIYGGTFEDENFVLRHDERGLLSMANAG 115
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE-MTVTGANDRPVKDVVISD 422
+TNGSQFFIT LD + VFGK++ G DV+++IE + V GA PV V I D
Sbjct: 117 NTNGSQFFITFKHNSRLDRKSTVFGKLILGNDVLKRIEYVDVHGAGSTPVVPVRIVD 173
>10_01_0309 + 3417602-3418147
Length = 181
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 422
+TNGSQFFIT K PWLDGRHV FG+V+ GM V+ I+ T T + + VK VVI+D
Sbjct: 123 NTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSG-KTVKPVVITD 177
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/94 (39%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +1
Query: 1 VIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKFHRVIKNFMIQXXXXXXXXXX 159
VI L VP T ENF +L ++ G YKGS FHRV+ FM Q
Sbjct: 28 VIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITAGNGT 87
Query: 160 XXRSIY---GERFEDENFKLKHYGAGWLSMANAG 252
S F DE F +KH G G +SMANAG
Sbjct: 88 GGESALDGAARHFPDEGFAVKHDGPGVVSMANAG 121
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 61.7 bits (143), Expect = 5e-10
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 IGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 183
I ++ K PKT NF +L+++ Y FHR+IK+F++Q SIYG
Sbjct: 23 IEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRGG-ESIYGA 78
Query: 184 RFEDE-NFKLKHYGAGWLSMANAG 252
+FEDE +LKH GAG LSMANAG
Sbjct: 79 KFEDEIRPELKHTGAGILSMANAG 102
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDT 425
+TNGSQFFIT LDG+H +FG+V +GM++V+++ T +DRP+ +V I T
Sbjct: 104 NTNGSQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRT 160
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 410
+TNGSQFFIT K P L+G + VF KV+ G +V+ +E TG DRP+ ++
Sbjct: 95 NTNGSQFFITYAKQPHLNGHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLAEI 146
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 10 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERF 189
+F P+T ENF L Y G+ FHR IK FMIQ SI+G++F
Sbjct: 16 VFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPTGTGKGGTSIWGKKF 71
Query: 190 EDE-NFKLKHYGAGWLSMANAGKTQMDLNFSSQLLRHP 300
DE LKH G +SMAN+G F + P
Sbjct: 72 ADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQP 109
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 28 PKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NF 204
P+T ENF E Y G FHR IKNFMIQ SI+G+ F+DE N
Sbjct: 366 PRTCENFLTHC---ENGYYNGLIFHRSIKNFMIQ-GGDPTGTGSGGESIWGKPFKDELNS 421
Query: 205 KLKHYGAGWLSMANAG 252
KL H G G +SMAN+G
Sbjct: 422 KLIHSGRGVVSMANSG 437
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +3
Query: 258 TNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEV 437
TNGSQFFI P L+ +H VFG V+ G+ + +E +DRP++++ I K V
Sbjct: 440 TNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDDRPLEEIKI--LKVSV 497
Query: 438 VAEPFSVTKE 467
P++ E
Sbjct: 498 FVNPYTEPDE 507
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 QDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTK 428
++ N SQF+IT +LD +H VFG V EG D + KI T RP KD+ I
Sbjct: 131 ENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRI--RH 188
Query: 429 TEVVAEPF 452
T V+ +PF
Sbjct: 189 TYVLDDPF 196
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 QDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTK 428
++ N SQF+IT +LD +H VFG V EG D + KI T RP KD+ I
Sbjct: 101 ENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPFKDIRIK--H 158
Query: 429 TEVVAEPF 452
T V+ +PF
Sbjct: 159 TYVLDDPF 166
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Frame = +1
Query: 28 PKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXXXXXRSIYGE--RFE 192
P TT+NF +L + + Y G FH+V K+F+ Q + +YG+ RF
Sbjct: 22 PLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGDSVYKFLYGDQARFF 78
Query: 193 DENFK--LKHYGAGWLSMANAGK 255
D+ + L+H G ++MA+AG+
Sbjct: 79 DDEIRPDLRHSKKGTIAMASAGE 101
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 IGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 183
I L+ K PK NF QL EG Y G+ FHRVIK+F++Q SIYG
Sbjct: 26 IELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGESIYGA 81
Query: 184 RFEDE-NFKLKHYGAGWLSMANAG 252
F DE + +L+ G ++ ANAG
Sbjct: 82 PFADEFHTRLRFNHRGLVACANAG 105
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 258 TNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMT--VTGANDRPVKDVVISDTKT 431
+NGSQFFI+ + WLD ++ +FGKV G + + + T +DRPV I
Sbjct: 109 SNGSQFFISLDRCDWLDKKNTIFGKV-TGDSIFNLLALADIETDKDDRPVYPQKI--LSV 165
Query: 432 EVVAEPF 452
EV+ PF
Sbjct: 166 EVLWNPF 172
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 398
+ G FITT P L+ + VVFG+V+ G D+VQ+IE T + +P
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIEEVDTDEHYQP 233
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 261 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 380
NG++F ITT P LD +V G+V++GMDV+ KI T
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Frame = +1
Query: 10 LFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQ 129
LF VPKTTENF L G G +KG+ HR++K FM Q
Sbjct: 28 LFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRILKGFMAQ 75
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 231 VIYG*CRQDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 410
++ G Q+T+ S V T + +HVVFGKV+ GM +++K+E V +P +V
Sbjct: 68 ILKGFMAQNTSLSPTPFLNVSTSCVS-KHVVFGKVVTGMPLLKKLE-AVGSDTGKPTCEV 125
Query: 411 VISD 422
I D
Sbjct: 126 KIVD 129
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 380
++ GS F I P LDG++ VFG++ +G D ++K+E T
Sbjct: 173 NSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPT 214
>02_01_0086 + 613113-613532
Length = 139
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 255 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 377
+ N SQFF + PW DG +VVFG ++ G ++ IE V
Sbjct: 81 ENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIEAEV 118
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 270 QFFITTVKTPW--LDGRHVVFGKVLEG 344
+F +TT P LDG+++VFG VLEG
Sbjct: 234 EFLVTTGPGPCPELDGQNIVFGTVLEG 260
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 201 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 58
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,257,747
Number of Sequences: 37544
Number of extensions: 288774
Number of successful extensions: 586
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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