Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01055
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 129 2e-30
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 129 2e-30
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 128 5e-30
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 122 3e-28
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 118 4e-27
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 71 8e-13
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 69 5e-12
11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728 31 0.75
02_03_0264 + 17059279-17059638,17060226-17060260,17060307-170603... 29 4.0
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207 28 7.0
03_05_0741 + 27287414-27287479,27287887-27287946,27288949-272891... 28 9.2
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 129 bits (312), Expect = 2e-30
Identities = 56/81 (69%), Positives = 72/81 (88%)
Frame = +2
Query: 254 KPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 433
K ASY+AIK +K A+EG LKGI+GY E+ +VS+DF+GDS SSIFDA AGI+LNDNFVKL
Sbjct: 276 KAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKL 335
Query: 434 ISWYDNEYGYSSRVIDLIKYI 496
++WYDNE+GYS+RVIDLI+++
Sbjct: 336 VAWYDNEWGYSNRVIDLIRHM 356
Score = 109 bits (262), Expect = 2e-24
Identities = 54/83 (65%), Positives = 60/83 (72%)
Frame = +3
Query: 3 NFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNG 182
NF I+EGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P LNG
Sbjct: 192 NFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNG 251
Query: 183 KLTGMAFRVPVANVSVVDLTVRL 251
KLTGM+FRVP +VSVVDLTVR+
Sbjct: 252 KLTGMSFRVPTVDVSVVDLTVRI 274
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 129 bits (312), Expect = 2e-30
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +2
Query: 254 KPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 433
KPASY+ IK +KE +EG LKGILGY E+ +VS+DF GD+ SSIFDA AGI+LNDNFVKL
Sbjct: 301 KPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAGIALNDNFVKL 360
Query: 434 ISWYDNEYGYSSRVIDLIKYI 496
+SWYDNE+GYSSRV+DLI+++
Sbjct: 361 VSWYDNEWGYSSRVVDLIRHM 381
Score = 111 bits (268), Expect = 4e-25
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F IVEGLM DGPS K WR GR A NIIP+STGAAKAVGKV+PALNGK
Sbjct: 218 FGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGK 277
Query: 186 LTGMAFRVPVANVSVVDLTVRL 251
LTGMAFRVP +VSVVDLTVRL
Sbjct: 278 LTGMAFRVPTVDVSVVDLTVRL 299
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 128 bits (309), Expect = 5e-30
Identities = 58/83 (69%), Positives = 71/83 (85%)
Frame = +2
Query: 254 KPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 433
KPASY+ IK +KE AEG LKGILGY E+ +VS+DF GDS SSIFDA AGI+L+D FVKL
Sbjct: 272 KPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALSDTFVKL 331
Query: 434 ISWYDNEYGYSSRVIDLIKYIQS 502
+SWYDNE+GYS+RVIDLI+++ S
Sbjct: 332 VSWYDNEWGYSTRVIDLIRHMHS 354
Score = 110 bits (265), Expect = 1e-24
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F IVEGLM DGPS K WR GR A NIIP+STGAAKAVGKV+PALNGK
Sbjct: 189 FGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGK 248
Query: 186 LTGMAFRVPVANVSVVDLTVRL 251
LTGMAFRVP +VSVVDLTVRL
Sbjct: 249 LTGMAFRVPTVDVSVVDLTVRL 270
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 122 bits (294), Expect = 3e-28
Identities = 54/81 (66%), Positives = 70/81 (86%)
Frame = +2
Query: 254 KPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 433
K ASYE +K +KEA+EG LKGILGYT++ VVS+DFIGD+ SSIFDA AGI L+ +F+KL
Sbjct: 328 KSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKL 387
Query: 434 ISWYDNEYGYSSRVIDLIKYI 496
+SWYDNE+GYS+RV+DLI ++
Sbjct: 388 VSWYDNEWGYSNRVLDLIGHM 408
Score = 114 bits (274), Expect = 8e-26
Identities = 58/82 (70%), Positives = 60/82 (73%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F I EGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+PALNGK
Sbjct: 245 FGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGK 304
Query: 186 LTGMAFRVPVANVSVVDLTVRL 251
LTGMAFRVP NVSVVDLT RL
Sbjct: 305 LTGMAFRVPTPNVSVVDLTCRL 326
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 118 bits (285), Expect = 4e-27
Identities = 51/81 (62%), Positives = 69/81 (85%)
Frame = +2
Query: 254 KPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKL 433
K ASY+ +K +K A+EG LKGILGYT++ VVS+DF+GD+ SSIFDA AGI L+ +F+KL
Sbjct: 387 KSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKL 446
Query: 434 ISWYDNEYGYSSRVIDLIKYI 496
+SWYDNE+GYS+RV+DLI ++
Sbjct: 447 VSWYDNEWGYSNRVLDLIAHM 467
Score = 112 bits (270), Expect = 3e-25
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F IVEGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGK
Sbjct: 304 FGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGK 363
Query: 186 LTGMAFRVPVANVSVVDLTVRL 251
LTGMAFRVP NVSVVDLT R+
Sbjct: 364 LTGMAFRVPTPNVSVVDLTCRI 385
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +2
Query: 290 KEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSS 469
++AA GPL GIL + +VS DF SS DA+ + + D+ VK+++WYDNE+GYS
Sbjct: 342 RKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQ 401
Query: 470 RVIDLIKYIQSK 505
RV+DL + SK
Sbjct: 402 RVVDLAHLVASK 413
Score = 68.1 bits (159), Expect = 7e-12
Identities = 39/80 (48%), Positives = 44/80 (55%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F IV+G M D L R R A NI+P STGAAKAV V+P L GK
Sbjct: 247 FGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPQLKGK 305
Query: 186 LTGMAFRVPVANVSVVDLTV 245
L G+A RVP NVSVVDL +
Sbjct: 306 LNGIALRVPTPNVSVVDLVI 325
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 68.5 bits (160), Expect = 5e-12
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = +3
Query: 6 FEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGK 185
F I++G M D L R R A NI+P STGAAKAV V+P L GK
Sbjct: 235 FGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNLKGK 293
Query: 186 LTGMAFRVPVANVSVVDLTVRL 251
L G+A RVP NVSVVDL V++
Sbjct: 294 LNGIALRVPTPNVSVVDLVVQV 315
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +2
Query: 269 EAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYD 448
E + Q +++A LKGIL + +VS DF S DA+ + + D+ VK+I+WYD
Sbjct: 322 EEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYD 381
Query: 449 NEYGYSSRVIDLIKYIQSKDK 511
NE+GYS RV+DL + ++ K
Sbjct: 382 NEWGYSQRVVDLADIVANQWK 402
>11_02_0118 - 8486986-8488925,8488971-8489041,8489884-8490728
Length = 951
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 374 HSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSKDKLLIKCMNV 535
H IFD S +NF+ + + ++ +G ++ L+ Y ++ +++ MNV
Sbjct: 491 HDVIFDLIISKSAEENFITVFGYQNHAFGPQDKIRRLVHYHGQEEIMVMSDMNV 544
>02_03_0264 +
17059279-17059638,17060226-17060260,17060307-17060385,
17060580-17061123,17061328-17061404
Length = 364
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 756 FFFFFDGIFYCNCISYFCDFVKYLNIANHF 667
F F FDGI Y I CDF+ ++ N +
Sbjct: 136 FHFAFDGIVYIELIENMCDFIYPEDLFNKY 165
>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
Length = 153
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 456 YSLSYQLISFTKLSFKEIPAAASKIEECESPMK 358
YSL + + TK FK+ K EEC +P K
Sbjct: 77 YSLVMKCLENTKNDFKKCKTLIDKYEECSNPPK 109
>03_05_0741 +
27287414-27287479,27287887-27287946,27288949-27289112,
27289158-27289241,27290115-27290178,27291181-27291334,
27291605-27291675,27292138-27292242,27292734-27292826,
27293672-27293746,27294114-27294199,27294293-27294499,
27294585-27294684,27294765-27294835,27294960-27295041,
27295920-27296078,27296480-27296533,27296775-27296817,
27297630-27297712,27298569-27298631,27298720-27298794,
27299620-27299745,27300267-27300499,27300611-27300655,
27300953-27301019,27302095-27302166,27302276-27302520,
27302598-27302655,27302743-27302910,27303224-27303298,
27303412-27303669
Length = 1101
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 571 IDNLDVHVEKYPYIHTFDQEFIFRLNVL 488
IDNL + + KY +IHT F + +NV+
Sbjct: 66 IDNLIIVLFKYRFIHTTSVVFFYGINVV 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,242
Number of Sequences: 37544
Number of extensions: 334079
Number of successful extensions: 901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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