Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01053
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 469  PKCVEMNNNVTTISTVATSKRTSAVGYK 552
            PKC+   +N  T     T K T+ +GY+
Sbjct: 2197 PKCILGRDNDKTKPKPTTMKPTTTIGYE 2224


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 463 TAPKCVEMNNNVTTISTVATSKRTSA 540
           T+P  V +NNN +T S+ ++   T+A
Sbjct: 154 TSPTPVSINNNTSTSSSASSPSVTAA 179


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 94  HVSLLFFYFCSKLFFYVI*SVHVISEFRLNY 2
           H+   F   C  +   V+  VHV  + R+NY
Sbjct: 73  HIFFFFAICCDFIALIVVNIVHVFRKRRVNY 103


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = -1

Query: 575 PIEIVELVLYPTAEVLFEVATVLIVVTLLFISTHLGAVLFHLYPLQYKTSEPSNL 411
           P E++++           +A + I++ +LF+ T +G   F     Q +  EP  L
Sbjct: 65  PFELIQIRTINFVATFRTIANI-ILMAVLFLGTFIGRAKFLAILKQMRNLEPEFL 118


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 182 VDMGKDILERIGPRYNKKTLTI 117
           +D GK++  +I P  N  TLTI
Sbjct: 63  LDSGKELYIKIIPNKNDGTLTI 84


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 661 ISCISRVLGVSLTIQP 708
           ISC+SR + ++L+I P
Sbjct: 547 ISCVSRSVSMALSIGP 562


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 661 ISCISRVLGVSLTIQP 708
           ISC+SR + ++L+I P
Sbjct: 547 ISCVSRSVSMALSIGP 562


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 641 VRVIKPRSGKRKGARSFRVQSLPI-EIVEL 555
           +R I    G+R+  R  R +SLP+ +++EL
Sbjct: 578 MRSITESGGRRRQTREKRKKSLPVRKLLEL 607


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -2

Query: 577 FQSKSWNSSCIQP 539
           F +K W++ C++P
Sbjct: 316 FNAKPWSNYCVEP 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,159
Number of Sequences: 336
Number of extensions: 4172
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)