Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01053
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694...    31   1.4  
05_07_0075 - 27513927-27514220,27514806-27515117,27515203-275153...    28   7.4  
12_01_0208 - 1567000-1567064,1567192-1567235,1567488-1567576,156...    28   9.7  

>04_04_0348 +
           24568834-24568904,24569019-24569148,24569310-24569459,
           24569546-24569650,24569808-24570029,24570162-24570274,
           24570371-24570470,24571125-24571325,24571401-24571549,
           24571624-24571765,24571851-24571991,24572098-24572286,
           24572622-24572835,24573198-24573291,24573671-24573905,
           24574242-24574433,24574919-24575017,24575443-24575532,
           24575709-24575912,24575994-24576269,24576974-24577096,
           24577453-24577608,24577686-24577802,24577878-24577957,
           24578173-24578377,24578485-24578687,24578882-24578933
          Length = 1350

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -1

Query: 773 CDNKLKTSVLRYGRIVNRR*KSGCIV--NETPSTLDIHEMALSSGAVRVIKPRS 618
           CD ++    L+YG +V R  + G IV  N  PS   +H M++ S   R++  R+
Sbjct: 419 CDRRIAARDLKYGCVVERHLEDGDIVLFNRQPS---LHRMSIMSHRARIMPWRT 469


>05_07_0075 -
           27513927-27514220,27514806-27515117,27515203-27515342,
           27515502-27515565,27515637-27516083,27516169-27516303,
           27517620-27517737,27517857-27517876
          Length = 509

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 498 NNDQYSCD-FEEDLCGWIQDEFHDFDWKRLNTKTPSSFTL 614
           N D Y+ + FEED  G+ +DE+ D+D+     ++  +FTL
Sbjct: 127 NIDDYAYEAFEEDY-GYDEDEYDDYDYDSTLYESEYNFTL 165


>12_01_0208 -
           1567000-1567064,1567192-1567235,1567488-1567576,
           1568219-1568326,1568416-1568501,1568969-1569056,
           1569171-1569344,1569844-1569919,1570003-1570052,
           1570140-1570202,1570285-1570338,1570433-1570535,
           1570615-1570666,1570849-1570909,1571034-1571074,
           1571245-1571323
          Length = 410

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 230 VCNPRYKLVGTNTLYVGWGVG 292
           VC P ++ +G + +  GWG+G
Sbjct: 118 VCRPEHQALGLSIVSTGWGIG 138


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,446,788
Number of Sequences: 37544
Number of extensions: 437281
Number of successful extensions: 1071
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)