Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01053
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 42 7e-04
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 32 0.41
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 28 6.6
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 6.6
U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical p... 28 8.8
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 GNKYSICRM-GRWEEQLPVCVKSGCPKLPPITNG-IQMTHH--DGAWLMTFCLPNYRLEG 423
G + S+C+ G W + P C K C LP + N I++ G C + ++G
Sbjct: 383 GVESSLCKSDGTWSSKQPNCTKVACTHLPEVANAKIEVPDRFLFGDVARVVCNSGFTIDG 442
Query: 424 SEVLYCNGYRWNSTAPKCVEMNNNVTTIS 510
E + C + S+ PKC++++ + +S
Sbjct: 443 PEEIRCLANQTVSSTPKCIDIDECSSGVS 471
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = +1
Query: 250 IGGNKYSICRMGRWEEQLPVCVKSGCPKLPPITNG-----IQMTHHDGAWLMTFCLPNYR 414
IG G W P C CP L P NG + + G ++ CLPNY
Sbjct: 555 IGEQNLHCTTQGTWSHDFPYCNVVHCPPLLPPANGHFIGEPKEINTKGDIVLLGCLPNYM 614
Query: 415 LEGSEVLYCNG-YRWNSTAPKC 477
L G + C W+ KC
Sbjct: 615 LTGGDFSVCQADGEWSEIKTKC 636
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Frame = +1
Query: 250 IGGNKYSIC-RMGRWEEQLPVCVKSGCPKLPPITNGIQMT-----HHDGAWLMTFCLPNY 411
+ G+ S C W P CV + CP + NG +MT + G C +
Sbjct: 495 VEGSAVSTCLEDATWSHSAPRCVAAHCPAV--FVNGTRMTVTVTSYRTGGVAHFKCHKGF 552
Query: 412 RLEGSEVLYCNGY-RWNSTAPKC 477
L G + L+C W+ P C
Sbjct: 553 TLIGEQNLHCTTQGTWSHDFPYC 575
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +1
Query: 271 ICRM-GRWEEQLPVCVKSGCPKLPPITNG---IQMTHHDGAWLMTFCLPNYRLEGSEVLY 438
+C+ G W P C C + P I NG ++ + + A T C +RL G E L
Sbjct: 587 VCQSDGIWSGSEPTCELVDCGRPPLIANGRVDVESSTFESAANYT-CHQGFRLIGPESLM 645
Query: 439 CNGY-RWNSTAPKCVEM 486
C W P C ++
Sbjct: 646 CGDRGEWQPATPFCYDI 662
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +1
Query: 256 GNKYSICRM-GRWEEQLPVCVKSGCPKLPPITNG-IQMTHHD-GAWLMTFCLPNYRLEGS 426
G IC G W P C + C LP + NG I+ + GA + CL EG+
Sbjct: 238 GQVQRICLAEGIWGGNEPRCEEIRCSVLPTLPNGYIEGSETSFGAVAVFRCLETMTHEGA 297
Query: 427 EVLYC-NGYRWNSTAPKCV 480
C +W++ P+C+
Sbjct: 298 SKAKCMEDGQWSAPIPRCL 316
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 337 PPITNGIQMTHHDGAWLMTFCLPNYRLEGSEVLYCNGYRWNSTAPKCVEMNNNVTTISTV 516
PP NG TH + + ++ +E SE L+ N + KC + N+ TTIS
Sbjct: 424 PPTLNGAD-THLLSGLNVHTAICDFFIENSESLFVNDI--DEEQSKCTSVENSFTTISKS 480
Query: 517 AT 522
AT
Sbjct: 481 AT 482
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 337 PPITNGIQMTHHDGAWLMTFCLPNYRLEGSEVLYCNGYRWNSTAPKCVEMNNNVTTISTV 516
PP NG TH + + ++ +E SE L+ N + KC + N+ TTIS
Sbjct: 441 PPTLNGAD-THLLSGLNVHTAICDFFIENSESLFVNDI--DEEQSKCTSVENSFTTISKS 497
Query: 517 AT 522
AT
Sbjct: 498 AT 499
>Z81078-4|CAJ15165.1| 392|Caenorhabditis elegans Hypothetical
protein F36H2.5 protein.
Length = 392
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 EEQLP-VCVKSGCPK---LPPITNGIQMTHHDGAWLMTFCLPNYRLEGSEVLYCNGYRWN 459
E QLP VCV PK + I +G + DG + +C + + G L C +W
Sbjct: 322 EHQLPGVCVPLTPPKNARVVYIQSGTSLDFEDGTTALLYCEEGFAVTGVATLRCETGQWE 381
Query: 460 STA 468
++
Sbjct: 382 PSS 384
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 218 IVKFVCNPRYKLVGTNTLYVGWGVGRSSCRSVLNQA 325
+ VC P L T LY WG G+S+ + L +A
Sbjct: 435 LADIVCEPSLSLPLTIGLYAKWGSGKSALLAKLKEA 470
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 218 IVKFVCNPRYKLVGTNTLYVGWGVGRSSCRSVLNQA 325
+ VC P L T LY WG G+S+ + L +A
Sbjct: 435 LADIVCEPSLSLPLTIGLYAKWGSGKSALLAKLKEA 470
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 218 IVKFVCNPRYKLVGTNTLYVGWGVGRSSCRSVLNQA 325
+ VC P L T LY WG G+S+ + L +A
Sbjct: 435 LADIVCEPSLSLPLTIGLYAKWGSGKSALLAKLKEA 470
>U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical
protein C50E3.15 protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 397 CLPNYRLEGSEVLYCNGYRWNSTAP 471
CL +Y + + Y +GY+WN+ P
Sbjct: 267 CLMDYEFQDDTLHYKSGYKWNTGEP 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,590,663
Number of Sequences: 27780
Number of extensions: 379606
Number of successful extensions: 1050
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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