Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01052
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical pr... 90 2e-18
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical ... 28 6.6
Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 28 8.7
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 28 8.7
>Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical
protein C47D12.6b protein.
Length = 684
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +2
Query: 2 FAAGFMSEVDTDAGDTLNKKVRNAQLAQFNYILVVGEREKNSGTVNVRTRDNKVHGEMSV 181
F AGF E + + GDT+NK+VR AQLAQFN+ILV+G +EK +GTVNVRTRDN V GE+++
Sbjct: 600 FEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVAL 659
Query: 182 EALIEHLNNLVRE 220
+ LI E
Sbjct: 660 DKLISKFRRFADE 672
>Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical
protein C47D12.6a protein.
Length = 725
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +2
Query: 2 FAAGFMSEVDTDAGDTLNKKVRNAQLAQFNYILVVGEREKNSGTVNVRTRDNKVHGEMSV 181
F AGF E + + GDT+NK+VR AQLAQFN+ILV+G +EK +GTVNVRTRDN V GE+++
Sbjct: 641 FEAGFEIEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVAL 700
Query: 182 EALIEHLNNLVRE 220
+ LI E
Sbjct: 701 DKLISKFRRFADE 713
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 110 EREKNSGTVNVRTRDNKVHGEMSVEALIEHLNNLVREKKLSEDSELLK 253
E++KN +N + + + IE LNNLV+ K E++ +++
Sbjct: 199 EKKKNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 110 EREKNSGTVNVRTRDNKVHGEMSVEALIEHLNNLVREKKLSEDSELLK 253
E++KN +N + + + IE LNNLV+ K E++ +++
Sbjct: 199 EKKKNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical protein
ZK270.1 protein.
Length = 983
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 534 VFVNKRVACVTLHAHHEKSAVKVLLLLMFNIAWSC 430
VFV V CV L H + +L+L+ +I W+C
Sbjct: 910 VFVKTMVLCVVLCNLHGLVFLPAILILLDSIRWAC 944
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical protein
ZK270.1 protein.
Length = 983
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 534 VFVNKRVACVTLHAHHEKSAVKVLLLLMFNIAWSC 430
VFV V CV L H + +L+L+ +I W+C
Sbjct: 910 VFVKTMVLCVVLCNLHGLVFLPAILILLDSIRWAC 944
>AL021446-1|CAA16265.1| 398|Caenorhabditis elegans Hypothetical
protein F14F4.1 protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -1
Query: 525 NKRVACVTLHAHHEKSAVKVLLLLMFN-IAWSCFIIVLKLNYHCL 394
+K C T++ + K+ VK+ ++MFN +AW I+ + Y+C+
Sbjct: 168 SKTGRCSTIYGQN-KNTVKITYVIMFNTLAWLLPSILAAVFYYCV 211
>Z69637-4|CAA93469.1| 539|Caenorhabditis elegans Hypothetical
protein F35G2.4 protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 434 DHAILNINKSKTLTADFS*CACSVTHATRLFTNTTQAQRVNVLNASYMVGG 586
+HA I+KS L D V FTN QA + A+Y +GG
Sbjct: 364 EHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGG 414
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Frame = -1
Query: 483 KSAVKVLLLLMFN------IAWSCFIIVLKLNYHCLI 391
K+ V+VLL FN AW+C + L+ ++HC++
Sbjct: 120 KNLVRVLLFASFNRNQTQLFAWNCSKLQLRSHHHCIM 156
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Frame = -1
Query: 483 KSAVKVLLLLMFN------IAWSCFIIVLKLNYHCLI 391
K+ V+VLL FN AW+C + L+ ++HC++
Sbjct: 120 KNLVRVLLFASFNRNQTQLFAWNCSKLQLRSHHHCIM 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,164,145
Number of Sequences: 27780
Number of extensions: 318110
Number of successful extensions: 761
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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