Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01050
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.9  
AY748828-1|AAV28176.1|   26|Anopheles gambiae cytochrome P450 pr...    23   6.9  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   9.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.1  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 506  SYHRITVESSHISLEICIHIS 444
            SYH IT  +S + LE CI  S
Sbjct: 2999 SYHNITNNNSVMRLEYCIDCS 3019


>AY748828-1|AAV28176.1|   26|Anopheles gambiae cytochrome P450
          protein.
          Length = 26

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
 Frame = +2

Query: 32 RTIFNTYSYL--PSTGNYLK 85
          + +F+  S++  PSTGNYLK
Sbjct: 3  KIVFDPKSFILSPSTGNYLK 22


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 664 SQCLVMSNTNSFTWHTWR 611
           S CL M N  ++TW T R
Sbjct: 317 SSCLKMLNRPNWTWQTGR 334


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 521 ENTKRAALMAAIREATSKYTKIMDAACNTDTPSMPGEGVRVTHNQALA 664
           E+++ +A +  I + TS+ ++  D     D P+ PG  V + H  A A
Sbjct: 176 ESSRISARLNTIDQNTSRASEDRDL----DEPTAPGLSVDIQHQMATA 219


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 616 WRVGIARSIHDLRVLTGSFPNSCHQ 542
           WRV  A ++ D RV+  +  + CH+
Sbjct: 184 WRVSNAYTLSDHRVIRYTAGSKCHR 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,972
Number of Sequences: 2352
Number of extensions: 12708
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)