Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01047
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 29 0.99
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 1.3
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 27 3.0
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 27 4.0
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 26 5.3
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 26 7.0
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 7.0
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 26 7.0
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 26 7.0
SPBC21.07c |ppk24||serine/threonine protein kinase Ppk24|Schizos... 26 7.0
SPAC23A1.11 |rpl1602|rpl16-2|60S ribosomal protein L13/L16|Schiz... 25 9.3
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 25 9.3
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 9.3
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 25 9.3
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 25 9.3
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 28.7 bits (61), Expect = 0.99
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 538 DYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVPIAQVPNRNEPDT 717
D+ DII + + L F+L+Q +T + L P I H + ++ ++E +T
Sbjct: 1382 DHQSFKDIIVHVANLELYYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSE-NT 1440
Query: 718 PGEINYKYVLEHL 756
P +N+ ++HL
Sbjct: 1441 PLILNFMVAIQHL 1453
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 99 SFMFAEASSIL---ERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGL 239
+F F ++S + E +AKDAG A SGF GFS N+ Q A +
Sbjct: 963 AFSFGASNSSMNKEENTPMAKDAGDTAPASGFKSGFSF-GANNSPQPASM 1011
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 434 TSPNVSELDFPLYQPLCEFFSHPRPSHIRLSY 339
T PN LDF LC +PR +H+R+ Y
Sbjct: 235 TIPNA--LDFLFMPSLCYQLYYPRTAHVRIHY 264
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 498 SISPWIFSPF-RTSTAYSKFFSNVSQCFGVGFSTLPAIM 385
++ P SP+ +S AY K + FG G S PA+M
Sbjct: 492 TLEPSPVSPYDESSDAYKKLAGAIRYTFGDGTSVTPALM 530
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -2
Query: 627 SDLLKMKNVQHQSQIWTVNTFNNVHSSSIITQEIFGHRILLIGS 496
+D+L M N + T+ ++++ + ++FGHR L +G+
Sbjct: 424 NDVLVMFNNMGVTNNLTIYEVETNYTANEVVSDVFGHRTLTVGA 467
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 329 TNLNTTIEYAKALDAKKIHIMAGKV 403
T+LNT+I++ + + A IH+ KV
Sbjct: 179 TDLNTSIKFTENISANAIHVNQDKV 203
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 621 LLKMKNVQHQSQIWTVNTFNNVHSSSIITQEIFGHRILLIGSISPWIFS 475
LL+++N+QH I + F SSI+ E+ + SIS +++S
Sbjct: 187 LLRVQNIQHPQTIDELAEFIGHEESSILLHELQRYLQFRPLSISSYLYS 235
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 547 RAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYI 669
R + I++ I PN+ ++ FH + D TH + LL Y+
Sbjct: 65 RELQIMRAISHPNIIKLIAFFHTHNPSKDETH-LCLLLEYM 104
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -1
Query: 463 VDSI*QIFLKRL---PMFRSWIFHFTSHYVNFFRIQGLRIFDC 344
++S+ +FL +F+ +I SH+ +F RI+ LR ++C
Sbjct: 48 IESVKDVFLVGFYDESVFKDFINEVASHFPSFNRIKYLREYNC 90
>SPBC21.07c |ppk24||serine/threonine protein kinase
Ppk24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 532 LSDYGRAVD-IIKRIDSPNLRLMLDIFHLQQIAGDITHNI 648
+SD+ +D +KRI P +R LD HL+ IA T I
Sbjct: 96 MSDFAIGLDPSLKRI-LPEIRFRLDFQHLKSIAKGATSTI 134
>SPAC23A1.11 |rpl1602|rpl16-2|60S ribosomal protein
L13/L16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 205 SKLKPKGKPDSTALNPASLAKAYRSKMEEASANIKDRLAQ 86
SKL+ + K S A A LAK + +A++++ +LA+
Sbjct: 155 SKLEERRKVKSAAFYQAKLAKQKKIASAKAASSVNGKLAE 194
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 428 ETFEKNLLYAVDVLKGENI 484
E FEKN+L +V+ + GEN+
Sbjct: 220 EKFEKNILASVNAVFGENL 238
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 403 HFTSHYVNFFRIQGLRIFDC 344
H+TSH VN + ++FDC
Sbjct: 704 HYTSHLVNTIMRKVSKVFDC 723
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 510 LLIGSISPWIFSPFRTSTAYSKFFSNVSQCFGVGFSTL 397
LL+ ++ WIFS + + F S+ +GF+ L
Sbjct: 65 LLLSMMNKWIFSESKMDFQFPLFLSSCQMLVQMGFAKL 102
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 150 KDAGFKAVESGFPFGFSLEQVRNAK-QSAGLQQIAI 254
K+AG+ E+GF +E+ N K +++GL+ AI
Sbjct: 662 KEAGYVVTEAGFASDIGMEKFFNIKCRTSGLKPDAI 697
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,281,265
Number of Sequences: 5004
Number of extensions: 71078
Number of successful extensions: 197
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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