Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01047
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-2|AAB53826.1| 262|Caenorhabditis elegans Hypothetical pr... 81 9e-16
AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical ... 32 0.53
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 29 3.7
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 28 8.7
>U00048-2|AAB53826.1| 262|Caenorhabditis elegans Hypothetical
protein C05D11.5 protein.
Length = 262
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +1
Query: 508 QYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQIAGDITHNITKLLPYIGHVPIA 687
+Y++P Y L++Y A+D+I+ S NL++ D FH QQI G I + KL YIG++ +A
Sbjct: 150 KYTIPGYHLNNYEDAMDVIQMDQSNNLKIQYDTFHAQQINGQIGAIMRKLKDYIGYIQVA 209
Query: 688 QVPNRNEPDTPGEINYKYVLEHL 756
QVPNR DT GEI+Y ++ + +
Sbjct: 210 QVPNRGACDTRGEIDYHFIFDEI 232
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 266 GDTTKGEVGVTSVPGKEDEFKTNLNTTIEYAKALDAKKIHIMAG--KVENPTPKHWETFE 439
G+ G G+ S+ + EF+ +L+T IEYAKAL ++H+MAG K ++ +T+
Sbjct: 67 GNWDDGFRGLASLKSAKKEFRKSLDTAIEYAKALGCCRVHVMAGIPKSDDDLENAHQTYS 126
Query: 440 KNLLYAVDVLKGENIQGLIEPINSILCP 523
+N+ +A + K + LIEPIN P
Sbjct: 127 ENVRFAAEKFKEHKLICLIEPINKYTIP 154
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 81 KFCANLSFMFAEASSILERYALAKDAGFKAVESGFPFGFSLEQVRNAKQSAGLQQIAI 254
+ ANL+ +F +L+RY A AGFK VE P+ E++R A L+ I
Sbjct: 6 RVAANLNMLFTNLP-LLQRYGAAASAGFKLVEVSIPYTEPAEKLREAADEYHLKHTLI 62
>AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical
protein R08F11.2 protein.
Length = 333
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = -1
Query: 319 VFFTRNRSYANFTFGRVSCF*VIAICCKPALCFAFLTCSKLKPKGKPDSTALNPASLAKA 140
+F R YAN G V+ F V+ + C + F F+ KLK S+ N S
Sbjct: 188 IFVNRTDEYANIPHG-VNNFLVVGLTCLLYVSFCFVLGRKLKQVSNGGSSKSNKMSTQIF 246
Query: 139 YRSKMEEASANIKD--RLAQNFIIIKFYTI 56
+S M A I + NFI + F+ I
Sbjct: 247 IQSAMICAINQIASIIYVIMNFIDVPFWLI 276
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 87 CANLSFMFAEASSILERYALAKDAGF 164
C NL F+F A ++ Y LAK AGF
Sbjct: 185 CQNLRFLFVPARTLRYSYVLAKSAGF 210
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 502 NQQYSMPKYFLSDYGRAVDIIKRIDSPN 585
NQQ+ +P+YF+ Y A++ + + PN
Sbjct: 152 NQQHVIPEYFVQSYENAIEYLLKTPRPN 179
>AL132951-6|CAC44308.2| 692|Caenorhabditis elegans Hypothetical
protein Y67H2A.7 protein.
Length = 692
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 514 SMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 603
++ +YF SD G DII+R D P +L ++
Sbjct: 501 NLMEYFFSDLGVMTDIIRRTDRPEEQLSIE 530
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 520 PKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 621
PK S+YGR D+I ID+ R+ +D H ++
Sbjct: 259 PKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 520 PKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 621
PK S+YGR D+I ID+ R+ +D H ++
Sbjct: 259 PKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 520 PKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 621
PK S+YGR D+I ID+ R+ +D H ++
Sbjct: 259 PKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 332 NLNTTIEYAKALDAKKIHIMAGKVENPTPKH 424
NLN + KA K+ +A K+E PT KH
Sbjct: 186 NLNLRLYEEKAQALAKLKTIAQKIEKPTKKH 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,733,731
Number of Sequences: 27780
Number of extensions: 382517
Number of successful extensions: 1050
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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