Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01044
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    33   0.30 
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z81112-5|CAB03276.1|  245|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81027-4|CAB02689.1|  245|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AY303576-1|AAP57298.1|  286|Caenorhabditis elegans cell death-re...    28   6.5  
AF036694-6|AAB88340.1|  286|Caenorhabditis elegans Cell-death-re...    28   6.5  
Z83125-3|CAB05626.1|  424|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    28   8.6  
Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z35639-6|CAA84698.2|  322|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion transpo...    28   8.6  
AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion transpo...    28   8.6  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 111 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKTSANFQNL 278
           + P ITP   N+   +  EQF+ ++ A N    N++        IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 111 NEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKTSANFQNL 278
           + P ITP   N+   +  EQF+ ++ A N    N++        IP + + N QNL
Sbjct: 142 HSPAITPFARNSEAARNIEQFIAQEEAANVPRANSQQQSPLIRPIPQQQALNIQNL 197


>Z81112-5|CAB03276.1|  245|Caenorhabditis elegans Hypothetical
           protein AH10.2 protein.
          Length = 245

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 243 IPLKTSANFQNLKLQLNYPRTLNSH 317
           + LKT+ +FQ ++L +  PRTL+ H
Sbjct: 36  LQLKTNTSFQEIQLAMGNPRTLSFH 60


>Z81027-4|CAB02689.1|  245|Caenorhabditis elegans Hypothetical
           protein AH10.2 protein.
          Length = 245

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 243 IPLKTSANFQNLKLQLNYPRTLNSH 317
           + LKT+ +FQ ++L +  PRTL+ H
Sbjct: 36  LQLKTNTSFQEIQLAMGNPRTLSFH 60


>Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical
           protein C11G6.1 protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 513 CRSISL*ILGFPSIHSSS*NRSCYSTRRSTHTYYHSTRLHCDGLRRRTPPCV--LARRYR 686
           C+SI L   GF S+  S+ ++     R   + Y HSTR   + L  RT P    +   ++
Sbjct: 21  CKSI-LRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFME-LAGRTKPVTNDVIAAFK 78

Query: 687 HQPASL 704
           HQ  SL
Sbjct: 79  HQKVSL 84


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 620  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 516
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
            T04A11.3 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 620  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 516
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 962  GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 996


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 620  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 516
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical
           protein F02D10.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 96  LFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASE 239
           +++R  +   TP  + N   + TEQ+ T D ++    L+ R+GD  SE
Sbjct: 89  IYERITQAYDTPGRQENGG-RYTEQYDTVDQSSKREHLSQRYGDHVSE 135


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 67  WLTFLKASSCCSIVQMSRSSHPRAKT---ILCFNSQN 168
           +L+FL  S+CCSI+     SH    T    LC NS N
Sbjct: 43  FLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTN 79


>AY303576-1|AAP57298.1|  286|Caenorhabditis elegans cell
           death-related nuclease 2 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 171 FLTEDYANNGIELNNRFGDDASEKIPLKTSANFQNLKL 284
           FL +D ++NG++   R G+   EK+ L+T A +   K+
Sbjct: 182 FLWKDRSDNGVQAGLRSGEIPIEKLVLETDAPYMYPKI 219


>AF036694-6|AAB88340.1|  286|Caenorhabditis elegans
           Cell-death-related nuclease protein2 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 171 FLTEDYANNGIELNNRFGDDASEKIPLKTSANFQNLKL 284
           FL +D ++NG++   R G+   EK+ L+T A +   K+
Sbjct: 182 FLWKDRSDNGVQAGLRSGEIPIEKLVLETDAPYMYPKI 219


>Z83125-3|CAB05626.1|  424|Caenorhabditis elegans Hypothetical
           protein T15D6.4 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -2

Query: 570 FTSLSEYLGIQEFRGKYFCKILTLTFLVS 484
           F+  SE+L I +  GK +C ++++TFLVS
Sbjct: 391 FSKFSEHLNIFK-AGKAYCFVVSVTFLVS 418


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 374 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVK 508
           + EN L+  +  C +   NL    FN C  +A        K+++K
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLK 491


>Z70757-2|CAA94798.1|  611|Caenorhabditis elegans Hypothetical
           protein ZK287.2 protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 KILQKYFPLNSWIPKYSLK 562
           K LQKY P+  W+P Y  K
Sbjct: 26  KKLQKYIPILEWLPNYQWK 44


>Z35639-6|CAA84698.2|  322|Caenorhabditis elegans Hypothetical
           protein D2045.7 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 254 DLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPE 382
           D  K+ +F  AT++P + + S    +H+E A EL  ++   PE
Sbjct: 159 DTIKMIDFGSATKMPIEIKTSADHHRHKEDAEELCSMMYRAPE 201


>AY954525-1|AAX34433.1|  611|Caenorhabditis elegans anion
           transporter SULP-8a protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 KILQKYFPLNSWIPKYSLK 562
           K LQKY P+  W+P Y  K
Sbjct: 26  KKLQKYIPILEWLPNYQWK 44


>AY887917-1|AAX34429.1|  611|Caenorhabditis elegans anion
           transporter SULP-8b protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 KILQKYFPLNSWIPKYSLK 562
           K LQKY P+  W+P Y  K
Sbjct: 26  KKLQKYIPILEWLPNYQWK 44


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 391 TRFAIDMRLCTSKPEPSVVQLLLL 462
           TRF I MR  TSK EP++ +LL L
Sbjct: 96  TRFIISMRDFTSKEEPTLSELLNL 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,752,040
Number of Sequences: 27780
Number of extensions: 371434
Number of successful extensions: 1001
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)