Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01040
(677 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 23 3.0
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 5.3
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 5.3
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 7.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.0
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 7.0
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 9.3
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 9.3
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 295 AASVPMCLSLAIAGNSFCGSDVGGF 369
AA+ P +S AG S C S+VG F
Sbjct: 100 AATDPSVVSKFRAGFSECASEVGRF 124
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 85 LGRLVVATVLGHGDLWTVEDTGL 17
L R VA L GDLW + G+
Sbjct: 369 LARHAVACFLTRGDLWLSWEEGM 391
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 283 TPPYCHLSIPRVSLGACEHG 224
T YCH +I + CE+G
Sbjct: 61 TGKYCHENINDCKVNPCENG 80
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 354 RTAETVPGYCQ*QAHRHGSRKERPLRRIVTCPYPEYL 244
R T+PG + AH +K R +R C Y +L
Sbjct: 96 RLVWTLPGKTKMIAHLKDKKKIRAKKRWSQCMYMYFL 132
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 354 RTAETVPGYCQ*QAHRHGSRKERPLRRIVTCPYPEYL 244
R T+PG + AH +K R +R C Y +L
Sbjct: 410 RLVWTLPGKTKMIAHLKDKKKIRAKKRWSQCMYMYFL 446
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 354 RTAETVPGYCQ*QAHRHGSRKERPLRRIVTCPYPEYL 244
R T+PG + AH +K R +R C Y +L
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIRAKKRWSQCMYMYFL 679
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 354 RTAETVPGYCQ*QAHRHGSRKERPLRRIVTCPYPEYL 244
R T+PG + AH +K R +R C Y +L
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIRAKKRWSQCMYMYFL 679
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.0
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 386 ASGYLKNPPTSEPQKLFPAIASDKHIGTEAARNDH 282
A+GY + Q+ P S H+ AA N H
Sbjct: 93 AAGYYGPQQQMDGQEYRPDSPSSMHMANTAAPNGH 127
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 24 VSSTVQRSPCPRTVATTSR 80
V++TVQ S C RT +R
Sbjct: 246 VTATVQLSTCTRTTLKNNR 264
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 140 YGLWNLRATNTG 175
YG++N+RA TG
Sbjct: 331 YGVFNIRARRTG 342
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 140 YGLWNLRATNTG 175
YG++N+RA TG
Sbjct: 331 YGVFNIRARRTG 342
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,029
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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