Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01040
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 88 1e-18
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 61 1e-10
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 60 3e-10
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 56 6e-09
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 31 0.20
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 28 1.1
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 27 2.5
SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces po... 27 3.3
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 5.8
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 25 7.6
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 88.2 bits (209), Expect = 1e-18
Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GD W L S+P L+ I+G +F G+DV GFF P+AEL RWY+ A F PFFR
Sbjct: 597 WIGDTMTTWEHLRGSIPTVLTNGISGMAFSGADVAGFFGNPDAELFVRWYETAIFYPFFR 656
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHY-- 612
AH+HI+TK IR RLL L+ +
Sbjct: 657 AHAHIDTKRREPWLYGEPYTSLVRELLR-IRY-RLLPTWYTAFYNSHTHGFPILYPQFLM 714
Query: 613 -PDEPANYPIDDQYLLGDALLV 675
P++ + IDDQ+ +GD+ L+
Sbjct: 715 HPEDEEGFAIDDQFYVGDSGLL 736
Score = 83.4 bits (197), Expect = 3e-17
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEPSVF GPE +M +D HY WEHR +HN YG + T GL+
Sbjct: 522 WNDMNEPSVFRGPETSMHRDAIHY-----------GGWEHRDIHNIYGHKCINGTYNGLI 570
Query: 182 DRADGVYRPFLLTRAVFAGT 241
R +G RPF+LTR+ FAGT
Sbjct: 571 KRGEGAVRPFILTRSFFAGT 590
Score = 31.1 bits (67), Expect = 0.15
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 518 RKRYALLDFWYTLFYEHTVDGLPVM 592
R RY LL WYT FY G P++
Sbjct: 684 RIRYRLLPTWYTAFYNSHTHGFPIL 708
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 61.3 bits (142), Expect = 1e-10
Identities = 37/139 (26%), Positives = 56/139 (40%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDN + WS + S+P L+ + G G+DV GF + EL +RW AF PF+R
Sbjct: 666 WLGDNYSLWSNMIFSIPGALTFNMVGLPMVGADVCGFMGNTDEELCSRWMALGAFLPFYR 725
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHYPD 618
H+ + + + LF +P+
Sbjct: 726 NHNSLGSISQEPYRWESVAESSRCAMNIRYSLLPYWYTLMYEASSQGLPLIRPLFFEFPN 785
Query: 619 EPANYPIDDQYLLGDALLV 675
EP+ D Q+++G ALLV
Sbjct: 786 EPSLANADRQFMVGSALLV 804
Score = 35.5 bits (78), Expect = 0.007
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 524 RYALLDFWYTLFYEHTVDGLPVM 592
RY+LL +WYTL YE + GLP++
Sbjct: 754 RYSLLPYWYTLMYEASSQGLPLI 776
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 125 HVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSGY 259
++ N YG R T L V RPF+L+R+ F G+ +Y+ +
Sbjct: 622 NLFNTYGYDQSRVTYDSLTSIEPNV-RPFILSRSTFVGSGKYAAH 665
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 60.1 bits (139), Expect = 3e-10
Identities = 36/139 (25%), Positives = 56/139 (40%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDN + WS + S+ + + G G+DV GF + EL +RW AF PF+R
Sbjct: 644 WLGDNHSLWSNMFFSISGMIVFNMMGIPMVGADVCGFLGDSDEELCSRWMAMGAFSPFYR 703
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHYPD 618
H++I + ALF +P+
Sbjct: 704 NHNNIYQISQEPYTWSSVAEASRRAMYIRYSLLPYWYTIMAKASQDGTPALRALFVEFPN 763
Query: 619 EPANYPIDDQYLLGDALLV 675
+P +D Q+++GD+LLV
Sbjct: 764 DPTLADVDRQFMVGDSLLV 782
Score = 29.9 bits (64), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 524 RYALLDFWYTLFYEHTVDGLPVM 592
RY+LL +WYT+ + + DG P +
Sbjct: 732 RYSLLPYWYTIMAKASQDGTPAL 754
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 55.6 bits (128), Expect = 6e-09
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDN ++WS + +S+ L+ + G G+DV G+ + EL RW AF PF+R
Sbjct: 669 WLGDNKSQWSDMVSSISSILTFNLLGIPMVGADVCGYNGNTDEELCARWMALGAFLPFYR 728
Query: 439 AHSHI 453
H+ +
Sbjct: 729 NHNSL 733
Score = 33.9 bits (74), Expect = 0.022
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 524 RYALLDFWYTLFYEHTVDGLPVM 592
RY+LL +WYTL + +VDG P++
Sbjct: 757 RYSLLPYWYTLMHTASVDGTPMV 779
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 203 RPFLLTRAVFAGTQRYSGY 259
RPFLL+R+ F G+ RY+ +
Sbjct: 650 RPFLLSRSTFVGSGRYAAH 668
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 343 NCSRLLPVTSTSARKPQGTTTPPYCHLSIPRVSLGACEHGPREQEGSVDA 194
N L ++ S+R+ +GT P Y I V+L + E+EG+VDA
Sbjct: 591 NTHPYLELSHVSSRELEGTKLPGYTKKEIQYVNLSTDDVKKLEEEGAVDA 640
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +1
Query: 73 QAAPGWSXXXXXXXXXXXXXQRIRAVEPARHQHGAAGPRRRRLQTLPAHEGR----VRRH 240
+AAP S + R V AR A+ R + +++P+HE +R+H
Sbjct: 268 EAAPSSSTESDEESIPLSYQSKRRRVS-ARASSSASSSSRTQAKSIPSHERTHYRLIRQH 326
Query: 241 PEILWVW 261
PE+ VW
Sbjct: 327 PELEHVW 333
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 367 ILRRQNRRNCSRLLPVTSTSARKPQGTTTPPYCHLS-IPRVSLGACEHGPREQEG 206
I+ + NC PVTS ++ + PP HLS R+S+G+ +Q G
Sbjct: 162 IVAKTKLHNCPNSEPVTSIWNQRSLSSGKPPSLHLSGNRRLSMGSPTKSIYDQNG 216
>SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -2
Query: 622 ARRGSAGTGPHDRQPVHRVLVEQSVPEVEQRVSLAVGVRMSAVVAAGYSQARAAW 458
A RGS+ T P R P+ V + S V Q V + A+V + +A AW
Sbjct: 273 ANRGSSSTMPQKRNPISCVYITASTSFVRQ----GVAALLDAMV-EDHERATGAW 322
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 317 CHWQ*PGTVSAVLTSEDSSSIPK 385
C W TVS+ +++++ SSIP+
Sbjct: 132 CKWTSSATVSSTISNDEMSSIPE 154
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 374 LKNPPTSEPQKLFPAIASDKHIGTEAARNDH-SAVLSPVHTQS 249
+ +PP + PQ+L P S+ H T+ N V SPVH ++
Sbjct: 37 ITSPPRNPPQRLHPVDFSE-HADTDDDMNHPLPRVQSPVHIKN 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,616
Number of Sequences: 5004
Number of extensions: 54790
Number of successful extensions: 188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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