Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01040
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 93 2e-19
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 72 5e-13
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 70 1e-12
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 65 4e-11
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 64 7e-11
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853... 39 0.003
12_02_1082 + 25919767-25919830,25920609-25920799 33 0.21
02_03_0227 + 16601538-16601908,16603197-16603378,16603495-166035... 32 0.49
04_04_0921 - 29431812-29432786 31 0.85
05_04_0223 - 19192411-19192951,19193363-19193388 31 1.1
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 30 1.5
01_01_0003 + 11774-12813,12906-13271,13359-13437,13840-13968,139... 30 1.5
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 30 2.0
07_01_1037 - 9026198-9026586,9026773-9026937,9027010-9027096,902... 29 2.6
04_03_0260 - 13580396-13582990 29 2.6
12_01_0318 - 2425178-2425267,2425830-2426008,2426594-2426654,242... 29 3.4
03_06_0194 + 32249846-32250562 29 3.4
01_04_0059 + 15544794-15545126 29 3.4
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 29 4.5
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 29 4.5
04_04_0500 - 25677767-25680850 29 4.5
02_04_0073 - 19471254-19472681 29 4.5
02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,522... 29 4.5
03_01_0656 - 4803111-4803133,4803609-4803641,4803772-4804135 28 6.0
02_05_0404 - 28700377-28701741,28701842-28702318 28 6.0
05_02_0075 - 6359897-6360292,6360463-6360465 28 7.9
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/83 (56%), Positives = 54/83 (65%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEPSVFNGPEVTMP+D HY EHR +HN YG + AT GLL
Sbjct: 508 WNDMNEPSVFNGPEVTMPRDAVHYGDV-----------EHRELHNAYGYYFHMATADGLL 556
Query: 182 DRADGVYRPFLLTRAVFAGTQRY 250
R +G RPF+L+RA FAG+QRY
Sbjct: 557 KRGEGKDRPFVLSRAFFAGSQRY 579
Score = 92.7 bits (220), Expect = 2e-19
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Frame = +1
Query: 256 VWTGDNTAEWSFLAASVPMCLSLAIAGNSFC-----GSDVGGFFKYPEAELMTRWYQAAA 420
+WTGDN+A+W L +S+PM L+L + G +F G+D+GGFF PE +L+ RWYQ A
Sbjct: 582 IWTGDNSADWDHLKSSIPMVLTLGLTGMTFSVGALTGADIGGFFGNPEPDLLVRWYQVGA 641
Query: 421 FQPFFRAHSHIETK 462
F PFFR H+H +TK
Sbjct: 642 FYPFFRGHAHHDTK 655
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 509 DANRKRYALLDFWYTLFYEHTVDGLPVM 592
+A RY+LL ++YTLF E +V G+PVM
Sbjct: 672 EAIHMRYSLLPYYYTLFREASVTGVPVM 699
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/139 (33%), Positives = 55/139 (39%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
WTGDN A W L S+ LS + G G+D+ GF EL +RW Q AF PF R
Sbjct: 292 WTGDNFATWDDLRYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSR 351
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHYPD 618
HS I T R L + LF YP
Sbjct: 352 DHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPG 411
Query: 619 EPANYPIDDQYLLGDALLV 675
+ A Y ID Q+LLG +LV
Sbjct: 412 DVATYGIDRQFLLGRGVLV 430
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 131 HNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSGY 259
HN +G RAT+ LL D RPF+L+R+ F G+ RY+ +
Sbjct: 251 HNLFGFLEARATHDALL--RDTGRRPFVLSRSTFVGSGRYTAH 291
>06_03_1108 - 27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 70.1 bits (164), Expect = 1e-12
Identities = 45/139 (32%), Positives = 54/139 (38%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
WTGDN A W L S+ LS + G G+D+ GF EL +RW Q AF PF R
Sbjct: 616 WTGDNAATWEDLHYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSR 675
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHYPD 618
HS I T R L + LF YP
Sbjct: 676 DHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPG 735
Query: 619 EPANYPIDDQYLLGDALLV 675
+ Y ID Q+LLG +LV
Sbjct: 736 DVETYGIDRQFLLGRGVLV 754
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 131 HNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSGY 259
HN +G RAT+ LL D RPF+L+R+ F G+ RY+ +
Sbjct: 575 HNLFGFLEARATHDALL--RDTGRRPFVLSRSTFVGSGRYTAH 615
>01_01_0195 +
1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/139 (27%), Positives = 53/139 (38%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
WTGDN W L S+ L+ I G G+D+ GF+ P EL RW + AF PF R
Sbjct: 569 WTGDNKGTWENLRYSISTMLNFGIFGMPMVGADICGFYPQPTEELCNRWIELGAFYPFSR 628
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVHSVLXXXXXXXXXXEALFQHYPD 618
H++ + R L +F +PD
Sbjct: 629 DHANFASPRQELYVWESVAKSARNALGMRYRLLPYLYTLNYQAHLTGAPVARPVFFSFPD 688
Query: 619 EPANYPIDDQYLLGDALLV 675
Y + QYLLG +++V
Sbjct: 689 FTPCYGLSTQYLLGASVMV 707
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 125 HVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSGY 259
+ H+ YG AT+ L G RPF+LTR+ F G+ Y+ +
Sbjct: 526 NAHSLYGFSQAIATHQAL-QGLQGK-RPFILTRSTFVGSGAYAAH 568
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 64.5 bits (150), Expect = 7e-11
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEP+VF TMP H G + + H + HN YG+ R+T G+
Sbjct: 326 WNDMNEPAVFKSTTKTMPVSNIH-----RGDDDIGGVQNHSYYHNVYGMLMARSTYEGMA 380
Query: 182 DRADGVYRPFLLTRAVFAGTQRYS 253
+A+ RPF+LTRA F G+QRY+
Sbjct: 381 -KANTEKRPFVLTRAGFIGSQRYA 403
Score = 62.1 bits (144), Expect = 4e-10
Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
WTGDN + W L SVPM L L ++G G D+GGF +L RW A PF R
Sbjct: 406 WTGDNLSNWEHLHMSVPMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGLGALFPFSR 465
Query: 439 AHSHIETKXXXXXXXXXXXXXXXXXXXXXIRAARLLVH--SVLXXXXXXXXXXEA-LFQH 609
H+ ET +R RLL H ++ A +F
Sbjct: 466 GHT--ETGSIDHEPWSFGEECEEVCRLALLRRYRLLPHIYTLFYFSHMKGTPVAAPVFFA 523
Query: 610 YPDEPANYPIDDQYLLGDALL 672
P +P I+ +LLG L+
Sbjct: 524 DPQDPELRKIETSFLLGPLLV 544
>07_03_0108 +
13481249-13481464,13484556-13484693,13485320-13485388,
13485462-13485599,13485685-13485802,13486265-13486347,
13486921-13487013,13487801-13487969,13488056-13488129,
13488448-13488633,13490009-13490101,13490469-13490534,
13490618-13490785,13491199-13491319,13492072-13492141,
13492389-13492476,13492565-13492685,13492964-13493157,
13493239-13493347,13493488-13493643,13493858-13493957,
13494115-13494288,13494549-13494694,13494796-13494860,
13495013-13495018
Length = 986
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 316 LSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHS 447
+ L ++G F G D+GGF +L RW A PF R HS
Sbjct: 479 VDLGLSGQPFAGPDIGGFAGNATPKLFGRWMGVGALFPFSRGHS 522
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 140 YGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYS 253
YG+ ++T G+ A+ RPF+LTRA F G QRY+
Sbjct: 368 YGMLMAKSTYEGM-KLANPTKRPFVLTRAGFIGQQRYA 404
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 256 VWTGDNTAEWSFLAASVPMCLSLAIAGNS 342
+WTGDN + W L S+ M L L NS
Sbjct: 406 MWTGDNVSNWEHLHMSIAMVLQLDFELNS 434
>12_02_1082 + 25919767-25919830,25920609-25920799
Length = 84
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 206 PFLLTRAVFAGTQRYSGYGQVTIRRSGRSL---RLPCRCAC 319
P LLT VFAGT R G G R+ +SL + PCR C
Sbjct: 16 PLLLTSGVFAGTVRTEGCGDTFFSRTYKSLFCRKGPCREHC 56
>02_03_0227 +
16601538-16601908,16603197-16603378,16603495-16603577,
16604609-16604717,16606754-16606806,16606988-16607023
Length = 277
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 670 EARPRAGTGRRWGSWPARRGSAGTGPHDRQPVHRVLVEQSVPEVEQR 530
EAR R RRWG RRG G ++ R + P VE R
Sbjct: 77 EARRRCAAKRRWGRRRWRRGEEVGGAEAKRTARRGAAKMGAPAVEAR 123
>04_04_0921 - 29431812-29432786
Length = 324
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -2
Query: 661 PRAGTGRRW---GSWPARRGSAGTG 596
P G GRRW GSW A RGS G G
Sbjct: 117 PFCGGGRRWRRCGSWSAVRGSGGRG 141
>05_04_0223 - 19192411-19192951,19193363-19193388
Length = 188
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 500 RGGGGRVQPGSRRLVSMCEWARKNGWNAAA 411
RGGG QP + ++ AR GWNAAA
Sbjct: 112 RGGGAAEQPDRKVAMAPAGSARPTGWNAAA 141
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 145 AVEPARHQHGAAGPRRRR 198
A P RH+HG A PRRRR
Sbjct: 10 AATPRRHRHGPATPRRRR 27
>01_01_0003 +
11774-12813,12906-13271,13359-13437,13840-13968,
13969-14171,14266-14359
Length = 636
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 137 EYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGT----QRYS-GYGQV--TIRRSGRSL 295
+YGLW + G ++ DGV R + T A + ++Y Y + +I+ SG +
Sbjct: 471 DYGLWT--DNSRGTYNKWDGVARSTIQTTAFYLEKTFEFRKYCLKYNLLMNSIQYSGTAF 528
Query: 296 RLPCRCACHWQ*PGTVSAVLTSEDSSSI 379
L C CA PG +AVL D++ I
Sbjct: 529 SLTCLCARLQVFPGAWTAVLVFLDNAGI 556
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 268 DNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFF 372
D E + +AA +C +L SFCG DVGG+F
Sbjct: 119 DGAEEGAVVAALTELCEAL-----SFCGEDVGGYF 148
>07_01_1037 -
9026198-9026586,9026773-9026937,9027010-9027096,
9027173-9027245,9027947-9028012,9028096-9028194,
9028710-9028772,9028959-9029345
Length = 442
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -1
Query: 416 AAWYHLVMSSASGYLKNPPTSEPQKLFPAIASDKHIGTEAARNDHSAVLSPVHTQS 249
AAW + SG+L+ P S P +L P D ++ + SP H S
Sbjct: 21 AAWADALDFDDSGFLRRGPASSPSRLRPPRPDDPAPAASLSQGAARGLRSPPHLAS 76
>04_03_0260 - 13580396-13582990
Length = 864
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 271 NTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAA 420
N + +AA+V + L LA A + V + YP A L TRW AA
Sbjct: 5 NLLSFDIVAAAVVVVLMLATAAPAI---SVQQLYDYPTANLSTRWVNNAA 51
>12_01_0318 -
2425178-2425267,2425830-2426008,2426594-2426654,
2426851-2427160,2428514-2428777,2432595-2433865
Length = 724
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 208 LPAHEGRVRRHPEILWVWTGDNTAEWSFLAASVPM 312
LP + HPE+ WVW D+ A ++ +A +P+
Sbjct: 218 LPLLRRLMLSHPEVEWVWWMDSDALFTDMAFELPL 252
>03_06_0194 + 32249846-32250562
Length = 238
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 512 RPDERGGGGRVQPG--SRRLVSMCEWARKNGWNAAAWYHLVMSSA 384
R GG+ + G RR +M W + GW W H++ +SA
Sbjct: 174 RQRRSSSGGKKEKGRVERRGSTMPFWGGREGWERELWLHVLDASA 218
>01_04_0059 + 15544794-15545126
Length = 110
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -1
Query: 533 ARISCGWRPDERGGGGRVQPGSRRLVSMCEWARKNGWNAAAWYHLVMSSASGYLKNPPTS 354
A CG D+ GGGG GS +S W R+ A Y LV+++ G P T
Sbjct: 31 AESCCGG--DQDGGGGAAAAGSVEALSWERWMRE----YCAGYQLVVAADDGKCAAPATE 84
Query: 353 E 351
+
Sbjct: 85 D 85
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 6/30 (20%)
Frame = -2
Query: 667 ARPRAGTGRRWGSW------PARRGSAGTG 596
A RAG GR WG W P RGS G G
Sbjct: 318 ATGRAGDGRGWGGWVALEAPPMPRGSVGLG 347
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 172 GAAGPRRRRLQTLPAHEGRVRRHPEILWVWTGDNTAE 282
G G + L L +E V+R E +WVW DN E
Sbjct: 332 GIGGVGKTALAQLVYNEPTVKRDFERIWVWVSDNYDE 368
>04_04_0500 - 25677767-25680850
Length = 1027
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 157 ARHQHGAAGPRRRRLQTLPAHEGRVRRHPEILWVWTGDNTAE 282
ARH A+ PR R QT A GR+ R L GD+ E
Sbjct: 58 ARHPFDASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVE 99
>02_04_0073 - 19471254-19472681
Length = 475
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 208 LPAHEGRVRRHPEILWVWTGDNTAEWSFLAASVPM 312
LP + HPE+ W+W D+ A ++ +A +P+
Sbjct: 229 LPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPL 263
>02_01_0699 -
5220896-5221345,5221403-5221504,5221694-5222343,
5222445-5222793,5223189-5223510,5223621-5224123,
5224486-5224578,5224708-5224759,5224837-5225129,
5225208-5225630,5225734-5226070,5226185-5226220,
5226272-5226589,5227465-5228450
Length = 1637
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 488 GRVQ-PGSRRLVSMCEWARKNGWNAAAWYHLVMSSASGYLKNPPTSEPQKL--FPAIASD 318
GRV P R++ W + +G AAA L + S+S Y S P L PA A+D
Sbjct: 15 GRVLGPALDRIIKNAAWRKHSGLVAAAKAALDLLSSSAYASASAPSPPSLLLGLPAAAAD 74
>03_01_0656 - 4803111-4803133,4803609-4803641,4803772-4804135
Length = 139
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -2
Query: 283 TPPY--CHLSIPRVSLGACEHGPREQ 212
TPP+ CHLSIP V+ GA E+ E+
Sbjct: 114 TPPFSKCHLSIPGVTGGAPEYNYSEK 139
>02_05_0404 - 28700377-28701741,28701842-28702318
Length = 613
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 554 ECTRSRAARISCGWRPDE 501
EC S A + GWRPDE
Sbjct: 224 ECVESFGAMVRAGWRPDE 241
>05_02_0075 - 6359897-6360292,6360463-6360465
Length = 132
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 673 PEARPRAGTGRRWGSWPAR-RGSA 605
P + P G RRWG W R RGSA
Sbjct: 50 PVSVPAKGEARRWGPWFGRTRGSA 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,405,650
Number of Sequences: 37544
Number of extensions: 498995
Number of successful extensions: 2384
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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