Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01040
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    26   0.95 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.7  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = -3

Query: 501 ARWWRPGTARLAPLGLDVRVGPEERLERGRL--VPPRHEL---SFGILEESSD 358
           +RWW P  A LA + L V      R +  RL  V P  E    S   +E++SD
Sbjct: 10  SRWWAPAMAILA-VALSVEAAEVARYDNYRLYRVTPHSEAQLRSVAAMEQASD 61


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 594 GPVPALPRRAGQLPHRRPVP 653
           GP+PA P    Q PH   +P
Sbjct: 85  GPMPAQPPHHHQHPHHHQLP 104


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 594 GPVPALPRRAGQLPHRRPVP 653
           GP+PA P    Q PH   +P
Sbjct: 85  GPMPAQPPHHHQHPHHHQLP 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,034
Number of Sequences: 2352
Number of extensions: 16124
Number of successful extensions: 228
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)