Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01040
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 108 4e-24
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 105 2e-23
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 58 8e-09
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U55364-11|AAA97976.1| 196|Caenorhabditis elegans Hypothetical p... 29 3.0
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 28 5.3
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 108 bits (259), Expect = 4e-24
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 256 VWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFF 435
+WTGDNTA+W L + PM LSL+IAG F G+DVGGFF P+ +L++RWYQ AAFQPFF
Sbjct: 574 IWTGDNTADWGHLEIAAPMTLSLSIAGVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFF 633
Query: 436 RAHSHIETK 462
RAH+HI+T+
Sbjct: 634 RAHAHIDTR 642
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEPSVF+GPE+TM K+ HY G+E HR +HN YG+ AT G++
Sbjct: 500 WNDMNEPSVFSGPEITMDKESIHY----GGIE-------HREIHNMYGMMYTSATFDGMI 548
Query: 182 DRADGVYRPFLLTRAVFAGTQR 247
R G RPFLL+RA F GTQR
Sbjct: 549 ARTGGKERPFLLSRAGFIGTQR 570
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 509 DANRKRYALLDFWYTLFYEHTVDGLPVM 592
+A R RYALL +WYTLF +HT +G+P M
Sbjct: 659 EALRTRYALLPYWYTLFQQHTENGVPPM 686
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 108 bits (259), Expect = 4e-24
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 256 VWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFF 435
+WTGDNTA+W L + PM LSL+IAG F G+DVGGFF P+ +L++RWYQ AAFQPFF
Sbjct: 588 IWTGDNTADWGHLEIAAPMTLSLSIAGVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFF 647
Query: 436 RAHSHIETK 462
RAH+HI+T+
Sbjct: 648 RAHAHIDTR 656
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEPSVF+GPE+TM K+ HY G+E HR +HN YG+ AT G++
Sbjct: 514 WNDMNEPSVFSGPEITMDKESIHY----GGIE-------HREIHNMYGMMYTSATFDGMI 562
Query: 182 DRADGVYRPFLLTRAVFAGTQR 247
R G RPFLL+RA F GTQR
Sbjct: 563 ARTGGKERPFLLSRAGFIGTQR 584
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 509 DANRKRYALLDFWYTLFYEHTVDGLPVM 592
+A R RYALL +WYTLF +HT +G+P M
Sbjct: 673 EALRTRYALLPYWYTLFQQHTENGVPPM 700
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 105 bits (253), Expect = 2e-23
Identities = 45/69 (65%), Positives = 53/69 (76%)
Frame = +1
Query: 256 VWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFF 435
VWTGDN A+W+ L S+PM LSL+ AG F G+DVGGFF P+ EL+ RWYQA AFQPFF
Sbjct: 566 VWTGDNKADWAHLKQSIPMLLSLSTAGLPFVGADVGGFFGNPDEELLVRWYQAGAFQPFF 625
Query: 436 RAHSHIETK 462
R HSH +TK
Sbjct: 626 RGHSHQDTK 634
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/82 (50%), Positives = 52/82 (63%)
Frame = +2
Query: 2 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLL 181
WNDMNEPSVFNGPE+TM KD +H+ +EHR VHN YG +T GL
Sbjct: 492 WNDMNEPSVFNGPEITMHKDAKHH-----------GEFEHRDVHNVYGFHQHSSTFEGLK 540
Query: 182 DRADGVYRPFLLTRAVFAGTQR 247
R++ RPF+L+R+ FAG+QR
Sbjct: 541 ARSNNEVRPFVLSRSFFAGSQR 562
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2
Query: 509 DANRKRYALLDFWYTLFYEHTVDGLPVM 592
+A + RYA L +WYTLFYEH G PVM
Sbjct: 651 NAIKTRYAFLPYWYTLFYEHAKTGKPVM 678
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/65 (44%), Positives = 32/65 (49%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDNTA W L SV + G + GSDV GF EL RW Q AF FFR
Sbjct: 584 WLGDNTARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFIGTTTEELCLRWQQMGAFHSFFR 643
Query: 439 AHSHI 453
H+ I
Sbjct: 644 NHNTI 648
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDNTA W L SV + + G + GSD+ GF EL RW+Q AF PF R
Sbjct: 589 WLGDNTARWGDLQTSVIGVMEFNMFGVPYVGSDICGFNGVSNEELCLRWHQFGAFSPFSR 648
Query: 439 AHS 447
H+
Sbjct: 649 DHN 651
>Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical
protein F53F4.8 protein.
Length = 856
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/63 (44%), Positives = 31/63 (49%)
Frame = +1
Query: 259 WTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFR 438
W GDNTA W L SV + G + GSDV GF EL RW Q AF FFR
Sbjct: 517 WLGDNTARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFLGTSNEELCLRWQQMGAFHSFFR 576
Query: 439 AHS 447
H+
Sbjct: 577 NHN 579
>U55364-11|AAA97976.1| 196|Caenorhabditis elegans Hypothetical
protein F21C10.4 protein.
Length = 196
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = -1
Query: 500 RGGGGRVQPGSRRLVSMCEWARKNGWNAAAWYHLVMSSASGYLKNPPTSEPQKLFPAIAS 321
RGGGGR G+R S ++R G ++ SS S YL ++ +F S
Sbjct: 28 RGGGGRGSSGARS--SSRSFSRSGGAGGGKFHS--SSSRSSYLNYDSSAFRSNVFKPTTS 83
Query: 320 DKHIGTEAARNDHSAVLSP 264
+ + T + + H ++ P
Sbjct: 84 NSYFATGTSGSTH-VIIQP 101
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 6 TI*TSPVSSTVQRSPCPRTVATTSRPRMV 92
T+ T+P+ +TV + P TV TTS P V
Sbjct: 103 TVTTTPIPTTVTSTHIPTTVTTTSIPTTV 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,930,448
Number of Sequences: 27780
Number of extensions: 333919
Number of successful extensions: 1269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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