Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01039
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF077531-7|AAL27240.1| 418|Caenorhabditis elegans Gex interacti... 29 3.5
AF077531-6|AAC64616.2| 408|Caenorhabditis elegans Gex interacti... 29 3.5
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 29 4.6
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 29 4.6
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 29 4.6
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 29 4.6
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 29 4.6
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 29 4.6
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 29 4.6
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 251 SSEGETY-LRLEEENLDMILDLPDLSHFDKTDPTQARLSE 367
+ +GE Y ++ +DM+ ++PD+ +FD+TD T +E
Sbjct: 323 NEDGEIYEFEDYDDFIDMLDEIPDVPYFDETDKTPEAQAE 362
>AF077531-7|AAL27240.1| 418|Caenorhabditis elegans Gex interacting
protein protein10, isoform b protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 423 DVTHDTTARPYWSIPTKEIP 482
D +H TTARPY+S P ++ P
Sbjct: 265 DFSHYTTARPYYSRPNRDDP 284
>AF077531-6|AAC64616.2| 408|Caenorhabditis elegans Gex interacting
protein protein10, isoform a protein.
Length = 408
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 423 DVTHDTTARPYWSIPTKEIP 482
D +H TTARPY+S P ++ P
Sbjct: 265 DFSHYTTARPYYSRPNRDDP 284
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 400 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 439
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 580 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 619
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 677 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 716
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 597 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 636
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 652 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 691
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 677 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 716
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 75 YKEYSIMLEMPFKIQQILNGTEHCNEPDRAFQNIGLHKGP 194
Y ++I+ +PF+ QQ + H N N G H+GP
Sbjct: 652 YVPHTILSMVPFEQQQYASPNHHNNSSSTGGYNNGHHQGP 691
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,585,610
Number of Sequences: 27780
Number of extensions: 310017
Number of successful extensions: 735
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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