Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01037
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat...    32   0.22 
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n...    31   0.38 
U13643-5|AAA21081.1|   89|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    27   6.1  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    27   6.1  

>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
            see also lmb-protein 1 protein.
          Length = 1067

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 105  SCISGKRGRRC--CNIWHWGSGDSISGSRARFQLSGN 209
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 15
           protein.
          Length = 1217

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 187 AREPLMESPDPQCHILQHRRPRLPLMQLEAPCSFNF 80
           +++PL ESP P  H+  H+ P +    ++   + NF
Sbjct: 888 SQQPLQESPQPNLHLQHHQTPPMQSQMMQPVVTDNF 923


>U13643-5|AAA21081.1|   89|Caenorhabditis elegans Hypothetical
           protein T07E3.2 protein.
          Length = 89

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 362 DLFCFIWN*NAFKFLINLSMRCKKKKKK 445
           DLF  I+N     F + L + CKKKK K
Sbjct: 4   DLFVIIFNFCIITFSVYLGIGCKKKKNK 31


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 110 TRCCTCCRPCCCGCGCGCCGC 130


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 108 TRCCTCCRPCCCGCGCGCGCC 128


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 94  TRCCTCCRPCCCGCGCGCGCC 114


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 97  TRCCTCCRPCCCGCGCGCGCC 117


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 109 TRCCTCCRPCCCGCGCGCGCC 129


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 276 TQCCRPLIPVVCLCSSGCASC 214
           T+CC    P  C C  GC  C
Sbjct: 109 TRCCTCCRPCCCGCGCGCGCC 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,956,867
Number of Sequences: 27780
Number of extensions: 195924
Number of successful extensions: 430
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)